Protein–RNA interactions for Protein: Q9Y566

SHANK1, SH3 and multiple ankyrin repeat domains protein 1, humanhuman

Predictions only

Length 2,161 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1Q9Y566 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.31■□□□□ 0.52
SHANK1Q9Y566 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SHANK1Q9Y566 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.31■□□□□ 0.52
SHANK1Q9Y566 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SHANK1Q9Y566 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SHANK1Q9Y566 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SHANK1Q9Y566 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SHANK1Q9Y566 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SHANK1Q9Y566 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SHANK1Q9Y566 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SHANK1Q9Y566 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.31■□□□□ 0.52
SHANK1Q9Y566 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.31■□□□□ 0.52
SHANK1Q9Y566 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.31■□□□□ 0.52
SHANK1Q9Y566 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SHANK1Q9Y566 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SHANK1Q9Y566 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SHANK1Q9Y566 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SHANK1Q9Y566 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.31■□□□□ 0.52
SHANK1Q9Y566 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.31■□□□□ 0.52
SHANK1Q9Y566 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.31■□□□□ 0.52
SHANK1Q9Y566 AC145285.6-201ENST00000604632 637 ntBASIC18.31■□□□□ 0.52
SHANK1Q9Y566 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.31■□□□□ 0.52
SHANK1Q9Y566 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
SHANK1Q9Y566 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SHANK1Q9Y566 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
SHANK1Q9Y566 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
SHANK1Q9Y566 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SHANK1Q9Y566 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SHANK1Q9Y566 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SHANK1Q9Y566 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SHANK1Q9Y566 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.3■□□□□ 0.52
SHANK1Q9Y566 KRT18P57-201ENST00000443599 1254 ntBASIC18.3■□□□□ 0.52
SHANK1Q9Y566 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.3■□□□□ 0.52
SHANK1Q9Y566 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.3■□□□□ 0.52
SHANK1Q9Y566 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SHANK1Q9Y566 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SHANK1Q9Y566 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.3■□□□□ 0.52
SHANK1Q9Y566 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.3■□□□□ 0.52
SHANK1Q9Y566 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.3■□□□□ 0.52
SHANK1Q9Y566 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SHANK1Q9Y566 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.3■□□□□ 0.52
SHANK1Q9Y566 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.3■□□□□ 0.52
SHANK1Q9Y566 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SHANK1Q9Y566 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SHANK1Q9Y566 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.3■□□□□ 0.52
SHANK1Q9Y566 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.3■□□□□ 0.52
SHANK1Q9Y566 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.3■□□□□ 0.52
SHANK1Q9Y566 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SHANK1Q9Y566 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHANK1Q9Y566 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.29■□□□□ 0.52
SHANK1Q9Y566 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHANK1Q9Y566 ARMC10P1-201ENST00000313754 855 ntBASIC18.29■□□□□ 0.52
SHANK1Q9Y566 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.29■□□□□ 0.52
SHANK1Q9Y566 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.29■□□□□ 0.52
SHANK1Q9Y566 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SHANK1Q9Y566 AC005521.1-201ENST00000393351 872 ntBASIC18.29■□□□□ 0.52
SHANK1Q9Y566 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SHANK1Q9Y566 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.29■□□□□ 0.52
SHANK1Q9Y566 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SHANK1Q9Y566 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.29■□□□□ 0.52
SHANK1Q9Y566 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.29■□□□□ 0.52
SHANK1Q9Y566 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.29■□□□□ 0.52
SHANK1Q9Y566 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHANK1Q9Y566 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHANK1Q9Y566 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHANK1Q9Y566 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.28■□□□□ 0.52
SHANK1Q9Y566 PGM5P4-201ENST00000421970 445 ntBASIC18.28■□□□□ 0.52
SHANK1Q9Y566 AL353807.1-201ENST00000427475 662 ntBASIC18.28■□□□□ 0.52
SHANK1Q9Y566 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SHANK1Q9Y566 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SHANK1Q9Y566 AF186192.3-201ENST00000583427 947 ntBASIC18.28■□□□□ 0.52
SHANK1Q9Y566 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.28■□□□□ 0.52
SHANK1Q9Y566 REXO1L10P-201ENST00000615707 1290 ntBASIC18.28■□□□□ 0.52
SHANK1Q9Y566 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHANK1Q9Y566 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.28■□□□□ 0.52
SHANK1Q9Y566 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SHANK1Q9Y566 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHANK1Q9Y566 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHANK1Q9Y566 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHANK1Q9Y566 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHANK1Q9Y566 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.28■□□□□ 0.52
SHANK1Q9Y566 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SHANK1Q9Y566 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SHANK1Q9Y566 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
SHANK1Q9Y566 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHANK1Q9Y566 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHANK1Q9Y566 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SHANK1Q9Y566 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHANK1Q9Y566 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.28■□□□□ 0.52
SHANK1Q9Y566 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHANK1Q9Y566 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.28■□□□□ 0.52
SHANK1Q9Y566 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHANK1Q9Y566 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SHANK1Q9Y566 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SHANK1Q9Y566 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SHANK1Q9Y566 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SHANK1Q9Y566 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SHANK1Q9Y566 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SHANK1Q9Y566 AL390955.1-201ENST00000428694 934 ntBASIC18.27■□□□□ 0.52
SHANK1Q9Y566 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms