Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRGV9Q99603 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRGV9Q99603 JTB-203ENST00000368589 1216 ntTSL 2 BASIC15.72■□□□□ 0.11
TRGV9Q99603 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRGV9Q99603 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRGV9Q99603 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC15.72■□□□□ 0.11
TRGV9Q99603 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC15.72■□□□□ 0.11
TRGV9Q99603 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRGV9Q99603 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC15.72■□□□□ 0.11
TRGV9Q99603 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
TRGV9Q99603 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRGV9Q99603 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC15.72■□□□□ 0.11
TRGV9Q99603 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC15.72■□□□□ 0.11
TRGV9Q99603 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC15.72■□□□□ 0.11
TRGV9Q99603 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC15.71■□□□□ 0.11
TRGV9Q99603 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRGV9Q99603 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRGV9Q99603 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC15.71■□□□□ 0.11
TRGV9Q99603 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRGV9Q99603 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRGV9Q99603 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRGV9Q99603 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRGV9Q99603 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC15.71■□□□□ 0.11
TRGV9Q99603 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRGV9Q99603 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
TRGV9Q99603 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRGV9Q99603 AC004854.2-201ENST00000608450 1441 ntBASIC15.71■□□□□ 0.11
TRGV9Q99603 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC15.71■□□□□ 0.11
TRGV9Q99603 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRGV9Q99603 AC125437.2-201ENST00000625180 2167 ntBASIC15.71■□□□□ 0.11
TRGV9Q99603 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC15.71■□□□□ 0.11
TRGV9Q99603 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
TRGV9Q99603 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
TRGV9Q99603 KRT18P14-201ENST00000534205 1250 ntBASIC15.71■□□□□ 0.11
TRGV9Q99603 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRGV9Q99603 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRGV9Q99603 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC15.71■□□□□ 0.11
TRGV9Q99603 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRGV9Q99603 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRGV9Q99603 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRGV9Q99603 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRGV9Q99603 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRGV9Q99603 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRGV9Q99603 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRGV9Q99603 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRGV9Q99603 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
TRGV9Q99603 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TRGV9Q99603 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRGV9Q99603 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRGV9Q99603 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRGV9Q99603 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRGV9Q99603 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRGV9Q99603 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRGV9Q99603 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRGV9Q99603 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRGV9Q99603 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TRGV9Q99603 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRGV9Q99603 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC15.7■□□□□ 0.1
TRGV9Q99603 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRGV9Q99603 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC15.7■□□□□ 0.1
TRGV9Q99603 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TRGV9Q99603 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC15.7■□□□□ 0.1
TRGV9Q99603 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
TRGV9Q99603 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC15.7■□□□□ 0.1
TRGV9Q99603 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TRGV9Q99603 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
TRGV9Q99603 AL691432.2-201ENST00000607222 2038 ntBASIC15.7■□□□□ 0.1
TRGV9Q99603 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRGV9Q99603 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRGV9Q99603 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TRGV9Q99603 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC15.7■□□□□ 0.1
TRGV9Q99603 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRGV9Q99603 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRGV9Q99603 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRGV9Q99603 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
TRGV9Q99603 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC15.69■□□□□ 0.1
TRGV9Q99603 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRGV9Q99603 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TRGV9Q99603 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRGV9Q99603 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
TRGV9Q99603 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRGV9Q99603 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRGV9Q99603 KRT19P1-201ENST00000405746 1186 ntBASIC15.69■□□□□ 0.1
TRGV9Q99603 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC15.69■□□□□ 0.1
TRGV9Q99603 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
TRGV9Q99603 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC15.69■□□□□ 0.1
TRGV9Q99603 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TRGV9Q99603 RAB43-208ENST00000615093 783 ntTSL 5 BASIC15.69■□□□□ 0.1
TRGV9Q99603 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
TRGV9Q99603 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TRGV9Q99603 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRGV9Q99603 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRGV9Q99603 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRGV9Q99603 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRGV9Q99603 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRGV9Q99603 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC15.69■□□□□ 0.1
TRGV9Q99603 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRGV9Q99603 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRGV9Q99603 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRGV9Q99603 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms