Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.78■□□□□ 0.92
RPRD1AQ96P16 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPRD1AQ96P16 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.78■□□□□ 0.92
RPRD1AQ96P16 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.78■□□□□ 0.92
RPRD1AQ96P16 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.78■□□□□ 0.92
RPRD1AQ96P16 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPRD1AQ96P16 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RPRD1AQ96P16 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RPRD1AQ96P16 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.78■□□□□ 0.92
RPRD1AQ96P16 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.78■□□□□ 0.92
RPRD1AQ96P16 TSPY20P-201ENST00000450910 630 ntBASIC20.78■□□□□ 0.92
RPRD1AQ96P16 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.78■□□□□ 0.92
RPRD1AQ96P16 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPRD1AQ96P16 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RPRD1AQ96P16 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPRD1AQ96P16 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPRD1AQ96P16 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.77■□□□□ 0.92
RPRD1AQ96P16 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RPRD1AQ96P16 DPP3P2-201ENST00000416030 1696 ntBASIC20.77■□□□□ 0.92
RPRD1AQ96P16 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPRD1AQ96P16 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
RPRD1AQ96P16 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPRD1AQ96P16 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPRD1AQ96P16 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPRD1AQ96P16 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.77■□□□□ 0.92
RPRD1AQ96P16 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.77■□□□□ 0.92
RPRD1AQ96P16 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.77■□□□□ 0.92
RPRD1AQ96P16 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.77■□□□□ 0.92
RPRD1AQ96P16 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.77■□□□□ 0.92
RPRD1AQ96P16 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPRD1AQ96P16 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.77■□□□□ 0.92
RPRD1AQ96P16 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
RPRD1AQ96P16 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPRD1AQ96P16 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPRD1AQ96P16 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPRD1AQ96P16 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPRD1AQ96P16 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
RPRD1AQ96P16 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPRD1AQ96P16 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
RPRD1AQ96P16 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
RPRD1AQ96P16 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
RPRD1AQ96P16 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
RPRD1AQ96P16 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RPRD1AQ96P16 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
RPRD1AQ96P16 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
RPRD1AQ96P16 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
RPRD1AQ96P16 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RPRD1AQ96P16 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
RPRD1AQ96P16 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
RPRD1AQ96P16 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RPRD1AQ96P16 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RPRD1AQ96P16 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPRD1AQ96P16 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPRD1AQ96P16 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPRD1AQ96P16 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RPRD1AQ96P16 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RPRD1AQ96P16 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPRD1AQ96P16 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RPRD1AQ96P16 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RPRD1AQ96P16 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPRD1AQ96P16 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPRD1AQ96P16 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPRD1AQ96P16 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPRD1AQ96P16 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RPRD1AQ96P16 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPRD1AQ96P16 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.75■□□□□ 0.91
RPRD1AQ96P16 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.75■□□□□ 0.91
RPRD1AQ96P16 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPRD1AQ96P16 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
RPRD1AQ96P16 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RPRD1AQ96P16 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPRD1AQ96P16 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPRD1AQ96P16 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPRD1AQ96P16 AL390719.1-204ENST00000412397 1219 ntBASIC20.75■□□□□ 0.91
RPRD1AQ96P16 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.75■□□□□ 0.91
RPRD1AQ96P16 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPRD1AQ96P16 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.75■□□□□ 0.91
RPRD1AQ96P16 SOX15-203ENST00000570788 1093 ntBASIC20.75■□□□□ 0.91
RPRD1AQ96P16 AC005829.2-201ENST00000571422 1056 ntBASIC20.75■□□□□ 0.91
RPRD1AQ96P16 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RPRD1AQ96P16 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPRD1AQ96P16 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPRD1AQ96P16 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.75■□□□□ 0.91
RPRD1AQ96P16 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
RPRD1AQ96P16 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.75■□□□□ 0.91
RPRD1AQ96P16 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPRD1AQ96P16 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.75■□□□□ 0.91
RPRD1AQ96P16 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPRD1AQ96P16 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RPRD1AQ96P16 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
RPRD1AQ96P16 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPRD1AQ96P16 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPRD1AQ96P16 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.74■□□□□ 0.91
RPRD1AQ96P16 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPRD1AQ96P16 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
RPRD1AQ96P16 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPRD1AQ96P16 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
RPRD1AQ96P16 ESRRAP1-201ENST00000400596 1257 ntBASIC20.74■□□□□ 0.91
RPRD1AQ96P16 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.74■□□□□ 0.91
RPRD1AQ96P16 FAM201B-201ENST00000458407 597 ntBASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms