Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF48Q96MX3 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF48Q96MX3 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF48Q96MX3 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF48Q96MX3 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.41■□□□□ 0.22
ZNF48Q96MX3 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.41■□□□□ 0.22
ZNF48Q96MX3 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
ZNF48Q96MX3 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.41■□□□□ 0.22
ZNF48Q96MX3 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF48Q96MX3 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF48Q96MX3 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC16.41■□□□□ 0.22
ZNF48Q96MX3 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
ZNF48Q96MX3 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
ZNF48Q96MX3 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF48Q96MX3 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF48Q96MX3 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
ZNF48Q96MX3 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC16.4■□□□□ 0.22
ZNF48Q96MX3 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC16.4■□□□□ 0.22
ZNF48Q96MX3 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF48Q96MX3 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF48Q96MX3 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
ZNF48Q96MX3 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF48Q96MX3 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF48Q96MX3 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.4■□□□□ 0.22
ZNF48Q96MX3 PGM5P4-201ENST00000421970 445 ntBASIC16.4■□□□□ 0.22
ZNF48Q96MX3 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF48Q96MX3 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.4■□□□□ 0.22
ZNF48Q96MX3 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
ZNF48Q96MX3 MIR4497-201ENST00000583208 89 ntBASIC16.4■□□□□ 0.22
ZNF48Q96MX3 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF48Q96MX3 BRWD1-AS2-201ENST00000603064 1028 ntBASIC16.4■□□□□ 0.22
ZNF48Q96MX3 MTDHP1-201ENST00000605323 784 ntBASIC16.4■□□□□ 0.22
ZNF48Q96MX3 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC16.4■□□□□ 0.22
ZNF48Q96MX3 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC16.4■□□□□ 0.22
ZNF48Q96MX3 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF48Q96MX3 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.22
ZNF48Q96MX3 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
ZNF48Q96MX3 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF48Q96MX3 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF48Q96MX3 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF48Q96MX3 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.39■□□□□ 0.21
ZNF48Q96MX3 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF48Q96MX3 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF48Q96MX3 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
ZNF48Q96MX3 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF48Q96MX3 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC16.39■□□□□ 0.21
ZNF48Q96MX3 SNORA78-201ENST00000459373 127 ntBASIC16.39■□□□□ 0.21
ZNF48Q96MX3 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF48Q96MX3 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.39■□□□□ 0.21
ZNF48Q96MX3 AC005829.2-201ENST00000571422 1056 ntBASIC16.39■□□□□ 0.21
ZNF48Q96MX3 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF48Q96MX3 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF48Q96MX3 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF48Q96MX3 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
ZNF48Q96MX3 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF48Q96MX3 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
ZNF48Q96MX3 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF48Q96MX3 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF48Q96MX3 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF48Q96MX3 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF48Q96MX3 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
ZNF48Q96MX3 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF48Q96MX3 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.38■□□□□ 0.21
ZNF48Q96MX3 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
ZNF48Q96MX3 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF48Q96MX3 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
ZNF48Q96MX3 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF48Q96MX3 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.38■□□□□ 0.21
ZNF48Q96MX3 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.38■□□□□ 0.21
ZNF48Q96MX3 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF48Q96MX3 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.38■□□□□ 0.21
ZNF48Q96MX3 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC16.38■□□□□ 0.21
ZNF48Q96MX3 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC16.38■□□□□ 0.21
ZNF48Q96MX3 AC120498.8-201ENST00000614275 531 ntBASIC16.38■□□□□ 0.21
ZNF48Q96MX3 AL023875.1-201ENST00000640777 796 ntBASIC16.38■□□□□ 0.21
ZNF48Q96MX3 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF48Q96MX3 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF48Q96MX3 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC16.38■□□□□ 0.21
ZNF48Q96MX3 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
ZNF48Q96MX3 MOK-233ENST00000524214 1539 ntTSL 2 BASIC16.38■□□□□ 0.21
ZNF48Q96MX3 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF48Q96MX3 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
ZNF48Q96MX3 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF48Q96MX3 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF48Q96MX3 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC16.38■□□□□ 0.21
ZNF48Q96MX3 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
ZNF48Q96MX3 AF106564.1-201ENST00000607058 2553 ntBASIC16.37■□□□□ 0.21
ZNF48Q96MX3 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ZNF48Q96MX3 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ZNF48Q96MX3 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
ZNF48Q96MX3 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
ZNF48Q96MX3 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
ZNF48Q96MX3 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
ZNF48Q96MX3 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.37■□□□□ 0.21
ZNF48Q96MX3 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
ZNF48Q96MX3 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ZNF48Q96MX3 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ZNF48Q96MX3 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ZNF48Q96MX3 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ZNF48Q96MX3 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms