Protein–RNA interactions for Protein: Q96KR7

PHACTR3, Phosphatase and actin regulator 3, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3Q96KR7 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
PHACTR3Q96KR7 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
PHACTR3Q96KR7 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC26.55■■□□□ 1.84
PHACTR3Q96KR7 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
PHACTR3Q96KR7 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC26.55■■□□□ 1.84
PHACTR3Q96KR7 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC26.55■■□□□ 1.84
PHACTR3Q96KR7 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC26.54■■□□□ 1.84
PHACTR3Q96KR7 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC26.54■■□□□ 1.84
PHACTR3Q96KR7 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
PHACTR3Q96KR7 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
PHACTR3Q96KR7 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
PHACTR3Q96KR7 AL390719.1-204ENST00000412397 1219 ntBASIC26.54■■□□□ 1.84
PHACTR3Q96KR7 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC26.54■■□□□ 1.84
PHACTR3Q96KR7 RHOD-202ENST00000532559 538 ntTSL 3 BASIC26.54■■□□□ 1.84
PHACTR3Q96KR7 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC26.54■■□□□ 1.84
PHACTR3Q96KR7 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
PHACTR3Q96KR7 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC26.54■■□□□ 1.84
PHACTR3Q96KR7 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
PHACTR3Q96KR7 ME2-216ENST00000639850 2331 ntTSL 5 BASIC26.54■■□□□ 1.84
PHACTR3Q96KR7 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
PHACTR3Q96KR7 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
PHACTR3Q96KR7 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC26.53■■□□□ 1.84
PHACTR3Q96KR7 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC26.53■■□□□ 1.84
PHACTR3Q96KR7 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PHACTR3Q96KR7 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
PHACTR3Q96KR7 ABHD17AP6-201ENST00000458502 1044 ntBASIC26.53■■□□□ 1.84
PHACTR3Q96KR7 RNF121-214ENST00000533380 870 ntTSL 3 BASIC26.53■■□□□ 1.84
PHACTR3Q96KR7 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC26.53■■□□□ 1.84
PHACTR3Q96KR7 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC26.53■■□□□ 1.84
PHACTR3Q96KR7 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC26.53■■□□□ 1.84
PHACTR3Q96KR7 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PHACTR3Q96KR7 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
PHACTR3Q96KR7 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
PHACTR3Q96KR7 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC26.52■■□□□ 1.84
PHACTR3Q96KR7 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC26.52■■□□□ 1.84
PHACTR3Q96KR7 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC26.52■■□□□ 1.84
PHACTR3Q96KR7 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC26.52■■□□□ 1.84
PHACTR3Q96KR7 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC26.51■■□□□ 1.84
PHACTR3Q96KR7 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC26.51■■□□□ 1.83
PHACTR3Q96KR7 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC26.51■■□□□ 1.83
PHACTR3Q96KR7 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC26.51■■□□□ 1.83
PHACTR3Q96KR7 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC26.51■■□□□ 1.83
PHACTR3Q96KR7 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
PHACTR3Q96KR7 SERF2-207ENST00000409614 582 ntTSL 2 BASIC26.51■■□□□ 1.83
PHACTR3Q96KR7 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC26.51■■□□□ 1.83
PHACTR3Q96KR7 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC26.51■■□□□ 1.83
PHACTR3Q96KR7 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC26.51■■□□□ 1.83
PHACTR3Q96KR7 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC26.51■■□□□ 1.83
PHACTR3Q96KR7 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC26.51■■□□□ 1.83
PHACTR3Q96KR7 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
PHACTR3Q96KR7 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
PHACTR3Q96KR7 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC26.5■■□□□ 1.83
PHACTR3Q96KR7 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
PHACTR3Q96KR7 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
PHACTR3Q96KR7 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC26.5■■□□□ 1.83
PHACTR3Q96KR7 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
PHACTR3Q96KR7 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
PHACTR3Q96KR7 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC26.5■■□□□ 1.83
PHACTR3Q96KR7 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PHACTR3Q96KR7 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC26.5■■□□□ 1.83
PHACTR3Q96KR7 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC26.5■■□□□ 1.83
PHACTR3Q96KR7 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC26.5■■□□□ 1.83
PHACTR3Q96KR7 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC26.5■■□□□ 1.83
PHACTR3Q96KR7 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PHACTR3Q96KR7 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
PHACTR3Q96KR7 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
PHACTR3Q96KR7 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
PHACTR3Q96KR7 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC26.49■■□□□ 1.83
PHACTR3Q96KR7 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC26.49■■□□□ 1.83
PHACTR3Q96KR7 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC26.49■■□□□ 1.83
PHACTR3Q96KR7 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC26.49■■□□□ 1.83
PHACTR3Q96KR7 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC26.49■■□□□ 1.83
PHACTR3Q96KR7 AL023875.1-201ENST00000640777 796 ntBASIC26.49■■□□□ 1.83
PHACTR3Q96KR7 DPP3P2-201ENST00000416030 1696 ntBASIC26.49■■□□□ 1.83
PHACTR3Q96KR7 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
PHACTR3Q96KR7 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
PHACTR3Q96KR7 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
PHACTR3Q96KR7 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC26.49■■□□□ 1.83
PHACTR3Q96KR7 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PHACTR3Q96KR7 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
PHACTR3Q96KR7 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC26.48■■□□□ 1.83
PHACTR3Q96KR7 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
PHACTR3Q96KR7 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC26.47■■□□□ 1.83
PHACTR3Q96KR7 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
PHACTR3Q96KR7 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PHACTR3Q96KR7 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
PHACTR3Q96KR7 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
PHACTR3Q96KR7 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC26.47■■□□□ 1.83
PHACTR3Q96KR7 ISG20-202ENST00000379224 540 ntTSL 3 BASIC26.47■■□□□ 1.83
PHACTR3Q96KR7 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
PHACTR3Q96KR7 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC26.47■■□□□ 1.83
PHACTR3Q96KR7 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
PHACTR3Q96KR7 USP36-216ENST00000589424 970 ntTSL 5 BASIC26.47■■□□□ 1.83
PHACTR3Q96KR7 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
PHACTR3Q96KR7 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
PHACTR3Q96KR7 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PHACTR3Q96KR7 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
PHACTR3Q96KR7 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
PHACTR3Q96KR7 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
PHACTR3Q96KR7 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC26.47■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms