Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAM1L1Q8N609 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAM1L1Q8N609 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
TRAM1L1Q8N609 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.95■□□□□ 0.78
TRAM1L1Q8N609 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAM1L1Q8N609 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.95■□□□□ 0.78
TRAM1L1Q8N609 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAM1L1Q8N609 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.95■□□□□ 0.78
TRAM1L1Q8N609 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAM1L1Q8N609 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAM1L1Q8N609 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRAM1L1Q8N609 AL390719.1-204ENST00000412397 1219 ntBASIC19.95■□□□□ 0.78
TRAM1L1Q8N609 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAM1L1Q8N609 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.95■□□□□ 0.78
TRAM1L1Q8N609 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.95■□□□□ 0.78
TRAM1L1Q8N609 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
TRAM1L1Q8N609 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.95■□□□□ 0.78
TRAM1L1Q8N609 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.95■□□□□ 0.78
TRAM1L1Q8N609 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.95■□□□□ 0.78
TRAM1L1Q8N609 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
TRAM1L1Q8N609 AL031963.3-201ENST00000606441 850 ntBASIC19.95■□□□□ 0.78
TRAM1L1Q8N609 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
TRAM1L1Q8N609 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.95■□□□□ 0.78
TRAM1L1Q8N609 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAM1L1Q8N609 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.95■□□□□ 0.78
TRAM1L1Q8N609 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAM1L1Q8N609 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRAM1L1Q8N609 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAM1L1Q8N609 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
TRAM1L1Q8N609 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAM1L1Q8N609 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAM1L1Q8N609 KRT8P20-201ENST00000423953 1409 ntBASIC19.94■□□□□ 0.78
TRAM1L1Q8N609 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
TRAM1L1Q8N609 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAM1L1Q8N609 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.94■□□□□ 0.78
TRAM1L1Q8N609 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
TRAM1L1Q8N609 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRAM1L1Q8N609 HLA-G-202ENST00000376815 851 ntBASIC19.94■□□□□ 0.78
TRAM1L1Q8N609 HLA-G-203ENST00000376818 1127 ntBASIC19.94■□□□□ 0.78
TRAM1L1Q8N609 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.94■□□□□ 0.78
TRAM1L1Q8N609 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.94■□□□□ 0.78
TRAM1L1Q8N609 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.94■□□□□ 0.78
TRAM1L1Q8N609 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
TRAM1L1Q8N609 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
TRAM1L1Q8N609 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRAM1L1Q8N609 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
TRAM1L1Q8N609 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
TRAM1L1Q8N609 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAM1L1Q8N609 KRT8P17-201ENST00000453110 1448 ntBASIC19.93■□□□□ 0.78
TRAM1L1Q8N609 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.93■□□□□ 0.78
TRAM1L1Q8N609 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.93■□□□□ 0.78
TRAM1L1Q8N609 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAM1L1Q8N609 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
TRAM1L1Q8N609 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
TRAM1L1Q8N609 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.93■□□□□ 0.78
TRAM1L1Q8N609 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.93■□□□□ 0.78
TRAM1L1Q8N609 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAM1L1Q8N609 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAM1L1Q8N609 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.93■□□□□ 0.78
TRAM1L1Q8N609 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.93■□□□□ 0.78
TRAM1L1Q8N609 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRAM1L1Q8N609 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.93■□□□□ 0.78
TRAM1L1Q8N609 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.93■□□□□ 0.78
TRAM1L1Q8N609 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
TRAM1L1Q8N609 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAM1L1Q8N609 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAM1L1Q8N609 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRAM1L1Q8N609 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAM1L1Q8N609 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRAM1L1Q8N609 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.92■□□□□ 0.78
TRAM1L1Q8N609 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRAM1L1Q8N609 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAM1L1Q8N609 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
TRAM1L1Q8N609 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
TRAM1L1Q8N609 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.92■□□□□ 0.78
TRAM1L1Q8N609 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.92■□□□□ 0.78
TRAM1L1Q8N609 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.92■□□□□ 0.78
TRAM1L1Q8N609 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.92■□□□□ 0.78
TRAM1L1Q8N609 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRAM1L1Q8N609 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.92■□□□□ 0.78
TRAM1L1Q8N609 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.92■□□□□ 0.78
TRAM1L1Q8N609 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAM1L1Q8N609 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRAM1L1Q8N609 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAM1L1Q8N609 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAM1L1Q8N609 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAM1L1Q8N609 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.92■□□□□ 0.78
TRAM1L1Q8N609 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.92■□□□□ 0.78
TRAM1L1Q8N609 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAM1L1Q8N609 SMG8-203ENST00000578922 2178 ntBASIC19.91■□□□□ 0.78
TRAM1L1Q8N609 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.91■□□□□ 0.78
TRAM1L1Q8N609 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAM1L1Q8N609 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAM1L1Q8N609 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRAM1L1Q8N609 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
TRAM1L1Q8N609 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
TRAM1L1Q8N609 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.91■□□□□ 0.78
TRAM1L1Q8N609 UNC93B4-201ENST00000505679 747 ntBASIC19.91■□□□□ 0.78
TRAM1L1Q8N609 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAM1L1Q8N609 SOX15-203ENST00000570788 1093 ntBASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms