Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 MIPEPP3-201ENST00000412105 444 ntBASIC18.53■□□□□ 0.56
CHMP1BQ7LBR1 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.53■□□□□ 0.56
CHMP1BQ7LBR1 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.53■□□□□ 0.56
CHMP1BQ7LBR1 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.53■□□□□ 0.56
CHMP1BQ7LBR1 AC010980.2-201ENST00000587099 1412 ntBASIC18.53■□□□□ 0.56
CHMP1BQ7LBR1 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.53■□□□□ 0.56
CHMP1BQ7LBR1 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
CHMP1BQ7LBR1 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP1BQ7LBR1 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP1BQ7LBR1 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CHMP1BQ7LBR1 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP1BQ7LBR1 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.53■□□□□ 0.56
CHMP1BQ7LBR1 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CHMP1BQ7LBR1 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CHMP1BQ7LBR1 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHMP1BQ7LBR1 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CHMP1BQ7LBR1 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.52■□□□□ 0.56
CHMP1BQ7LBR1 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHMP1BQ7LBR1 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CHMP1BQ7LBR1 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHMP1BQ7LBR1 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHMP1BQ7LBR1 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHMP1BQ7LBR1 LSM12P1-201ENST00000411836 588 ntBASIC18.52■□□□□ 0.56
CHMP1BQ7LBR1 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.52■□□□□ 0.56
CHMP1BQ7LBR1 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
CHMP1BQ7LBR1 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.52■□□□□ 0.56
CHMP1BQ7LBR1 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.52■□□□□ 0.56
CHMP1BQ7LBR1 AC142086.2-201ENST00000569753 217 ntBASIC18.52■□□□□ 0.56
CHMP1BQ7LBR1 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.52■□□□□ 0.56
CHMP1BQ7LBR1 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHMP1BQ7LBR1 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CHMP1BQ7LBR1 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CHMP1BQ7LBR1 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
CHMP1BQ7LBR1 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CHMP1BQ7LBR1 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP1BQ7LBR1 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP1BQ7LBR1 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP1BQ7LBR1 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP1BQ7LBR1 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.51■□□□□ 0.55
CHMP1BQ7LBR1 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP1BQ7LBR1 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP1BQ7LBR1 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP1BQ7LBR1 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP1BQ7LBR1 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CHMP1BQ7LBR1 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.51■□□□□ 0.55
CHMP1BQ7LBR1 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.51■□□□□ 0.55
CHMP1BQ7LBR1 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP1BQ7LBR1 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP1BQ7LBR1 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CHMP1BQ7LBR1 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.51■□□□□ 0.55
CHMP1BQ7LBR1 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.51■□□□□ 0.55
CHMP1BQ7LBR1 GUSBP6-202ENST00000438529 1198 ntBASIC18.51■□□□□ 0.55
CHMP1BQ7LBR1 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.51■□□□□ 0.55
CHMP1BQ7LBR1 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CHMP1BQ7LBR1 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.51■□□□□ 0.55
CHMP1BQ7LBR1 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.51■□□□□ 0.55
CHMP1BQ7LBR1 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.51■□□□□ 0.55
CHMP1BQ7LBR1 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP1BQ7LBR1 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CHMP1BQ7LBR1 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP1BQ7LBR1 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.51■□□□□ 0.55
CHMP1BQ7LBR1 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP1BQ7LBR1 Z98882.1-201ENST00000622160 2253 ntBASIC18.51■□□□□ 0.55
CHMP1BQ7LBR1 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHMP1BQ7LBR1 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHMP1BQ7LBR1 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.5■□□□□ 0.55
CHMP1BQ7LBR1 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHMP1BQ7LBR1 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CHMP1BQ7LBR1 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHMP1BQ7LBR1 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHMP1BQ7LBR1 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.5■□□□□ 0.55
CHMP1BQ7LBR1 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CHMP1BQ7LBR1 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.5■□□□□ 0.55
CHMP1BQ7LBR1 AC069152.1-201ENST00000438030 544 ntBASIC18.5■□□□□ 0.55
CHMP1BQ7LBR1 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.5■□□□□ 0.55
CHMP1BQ7LBR1 AC100791.3-201ENST00000617619 330 ntBASIC18.5■□□□□ 0.55
CHMP1BQ7LBR1 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CHMP1BQ7LBR1 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHMP1BQ7LBR1 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHMP1BQ7LBR1 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHMP1BQ7LBR1 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CHMP1BQ7LBR1 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.5■□□□□ 0.55
CHMP1BQ7LBR1 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHMP1BQ7LBR1 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CHMP1BQ7LBR1 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.49■□□□□ 0.55
CHMP1BQ7LBR1 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHMP1BQ7LBR1 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CHMP1BQ7LBR1 MCRIP2P1-201ENST00000394346 511 ntBASIC18.49■□□□□ 0.55
CHMP1BQ7LBR1 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CHMP1BQ7LBR1 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHMP1BQ7LBR1 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHMP1BQ7LBR1 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.49■□□□□ 0.55
CHMP1BQ7LBR1 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.49■□□□□ 0.55
CHMP1BQ7LBR1 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.49■□□□□ 0.55
CHMP1BQ7LBR1 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHMP1BQ7LBR1 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.49■□□□□ 0.55
CHMP1BQ7LBR1 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHMP1BQ7LBR1 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.49■□□□□ 0.55
CHMP1BQ7LBR1 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHMP1BQ7LBR1 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms