Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PTCHD4Q6ZW05 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PTCHD4Q6ZW05 AC008175.2-201ENST00000612840 297 ntBASIC18.5■□□□□ 0.55
PTCHD4Q6ZW05 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PTCHD4Q6ZW05 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTCHD4Q6ZW05 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.5■□□□□ 0.55
PTCHD4Q6ZW05 AC098818.2-201ENST00000564925 2320 ntBASIC18.5■□□□□ 0.55
PTCHD4Q6ZW05 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTCHD4Q6ZW05 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.5■□□□□ 0.55
PTCHD4Q6ZW05 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.5■□□□□ 0.55
PTCHD4Q6ZW05 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTCHD4Q6ZW05 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.49■□□□□ 0.55
PTCHD4Q6ZW05 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTCHD4Q6ZW05 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
PTCHD4Q6ZW05 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.49■□□□□ 0.55
PTCHD4Q6ZW05 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.49■□□□□ 0.55
PTCHD4Q6ZW05 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTCHD4Q6ZW05 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
PTCHD4Q6ZW05 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTCHD4Q6ZW05 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.49■□□□□ 0.55
PTCHD4Q6ZW05 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.49■□□□□ 0.55
PTCHD4Q6ZW05 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTCHD4Q6ZW05 POU5F1P4-201ENST00000413175 1085 ntBASIC18.49■□□□□ 0.55
PTCHD4Q6ZW05 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTCHD4Q6ZW05 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTCHD4Q6ZW05 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.49■□□□□ 0.55
PTCHD4Q6ZW05 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PTCHD4Q6ZW05 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTCHD4Q6ZW05 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PTCHD4Q6ZW05 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTCHD4Q6ZW05 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PTCHD4Q6ZW05 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.49■□□□□ 0.55
PTCHD4Q6ZW05 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.49■□□□□ 0.55
PTCHD4Q6ZW05 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTCHD4Q6ZW05 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTCHD4Q6ZW05 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.49■□□□□ 0.55
PTCHD4Q6ZW05 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTCHD4Q6ZW05 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTCHD4Q6ZW05 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.49■□□□□ 0.55
PTCHD4Q6ZW05 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTCHD4Q6ZW05 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.48■□□□□ 0.55
PTCHD4Q6ZW05 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTCHD4Q6ZW05 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PTCHD4Q6ZW05 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.48■□□□□ 0.55
PTCHD4Q6ZW05 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
PTCHD4Q6ZW05 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.48■□□□□ 0.55
PTCHD4Q6ZW05 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.48■□□□□ 0.55
PTCHD4Q6ZW05 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTCHD4Q6ZW05 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
PTCHD4Q6ZW05 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTCHD4Q6ZW05 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTCHD4Q6ZW05 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PTCHD4Q6ZW05 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PTCHD4Q6ZW05 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.48■□□□□ 0.55
PTCHD4Q6ZW05 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.48■□□□□ 0.55
PTCHD4Q6ZW05 AC138907.5-202ENST00000569484 235 ntBASIC18.48■□□□□ 0.55
PTCHD4Q6ZW05 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTCHD4Q6ZW05 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
PTCHD4Q6ZW05 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTCHD4Q6ZW05 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PTCHD4Q6ZW05 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.48■□□□□ 0.55
PTCHD4Q6ZW05 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
PTCHD4Q6ZW05 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
PTCHD4Q6ZW05 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
PTCHD4Q6ZW05 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PTCHD4Q6ZW05 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTCHD4Q6ZW05 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
PTCHD4Q6ZW05 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTCHD4Q6ZW05 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTCHD4Q6ZW05 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTCHD4Q6ZW05 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.47■□□□□ 0.55
PTCHD4Q6ZW05 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.47■□□□□ 0.55
PTCHD4Q6ZW05 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
PTCHD4Q6ZW05 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTCHD4Q6ZW05 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.47■□□□□ 0.55
PTCHD4Q6ZW05 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTCHD4Q6ZW05 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.47■□□□□ 0.55
PTCHD4Q6ZW05 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.47■□□□□ 0.55
PTCHD4Q6ZW05 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
PTCHD4Q6ZW05 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.47■□□□□ 0.55
PTCHD4Q6ZW05 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
PTCHD4Q6ZW05 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTCHD4Q6ZW05 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTCHD4Q6ZW05 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.47■□□□□ 0.55
PTCHD4Q6ZW05 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTCHD4Q6ZW05 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTCHD4Q6ZW05 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTCHD4Q6ZW05 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PTCHD4Q6ZW05 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.46■□□□□ 0.55
PTCHD4Q6ZW05 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTCHD4Q6ZW05 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTCHD4Q6ZW05 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTCHD4Q6ZW05 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PTCHD4Q6ZW05 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.46■□□□□ 0.55
PTCHD4Q6ZW05 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PTCHD4Q6ZW05 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTCHD4Q6ZW05 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
PTCHD4Q6ZW05 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTCHD4Q6ZW05 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.46■□□□□ 0.55
PTCHD4Q6ZW05 RARRES2P11-201ENST00000635158 484 ntBASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms