Protein–RNA interactions for Protein: Q3ZAQ7

VMA21, Vacuolar ATPase assembly integral membrane protein VMA21, humanhuman

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21Q3ZAQ7 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
VMA21Q3ZAQ7 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
VMA21Q3ZAQ7 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VMA21Q3ZAQ7 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VMA21Q3ZAQ7 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VMA21Q3ZAQ7 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VMA21Q3ZAQ7 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
VMA21Q3ZAQ7 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VMA21Q3ZAQ7 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VMA21Q3ZAQ7 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
VMA21Q3ZAQ7 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC16.28■□□□□ 0.2
VMA21Q3ZAQ7 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC16.28■□□□□ 0.2
VMA21Q3ZAQ7 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
VMA21Q3ZAQ7 MIR5787-201ENST00000611784 55 ntBASIC16.28■□□□□ 0.2
VMA21Q3ZAQ7 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VMA21Q3ZAQ7 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
VMA21Q3ZAQ7 WWOX-218ENST00000627394 894 ntTSL 5 BASIC16.28■□□□□ 0.2
VMA21Q3ZAQ7 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC16.28■□□□□ 0.2
VMA21Q3ZAQ7 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
VMA21Q3ZAQ7 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VMA21Q3ZAQ7 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC16.28■□□□□ 0.2
VMA21Q3ZAQ7 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VMA21Q3ZAQ7 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VMA21Q3ZAQ7 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VMA21Q3ZAQ7 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VMA21Q3ZAQ7 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VMA21Q3ZAQ7 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
VMA21Q3ZAQ7 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VMA21Q3ZAQ7 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VMA21Q3ZAQ7 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC16.27■□□□□ 0.2
VMA21Q3ZAQ7 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC16.27■□□□□ 0.2
VMA21Q3ZAQ7 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC16.27■□□□□ 0.2
VMA21Q3ZAQ7 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC16.27■□□□□ 0.2
VMA21Q3ZAQ7 AL356652.1-201ENST00000615962 565 ntBASIC16.27■□□□□ 0.2
VMA21Q3ZAQ7 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VMA21Q3ZAQ7 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
VMA21Q3ZAQ7 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VMA21Q3ZAQ7 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VMA21Q3ZAQ7 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC16.27■□□□□ 0.19
VMA21Q3ZAQ7 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
VMA21Q3ZAQ7 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
VMA21Q3ZAQ7 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
VMA21Q3ZAQ7 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
VMA21Q3ZAQ7 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
VMA21Q3ZAQ7 AC087633.2-202ENST00000565166 1439 ntBASIC16.27■□□□□ 0.19
VMA21Q3ZAQ7 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC16.27■□□□□ 0.19
VMA21Q3ZAQ7 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
VMA21Q3ZAQ7 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VMA21Q3ZAQ7 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VMA21Q3ZAQ7 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC16.26■□□□□ 0.19
VMA21Q3ZAQ7 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VMA21Q3ZAQ7 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VMA21Q3ZAQ7 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VMA21Q3ZAQ7 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC16.26■□□□□ 0.19
VMA21Q3ZAQ7 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC16.26■□□□□ 0.19
VMA21Q3ZAQ7 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VMA21Q3ZAQ7 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
VMA21Q3ZAQ7 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
VMA21Q3ZAQ7 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VMA21Q3ZAQ7 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
VMA21Q3ZAQ7 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VMA21Q3ZAQ7 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VMA21Q3ZAQ7 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
VMA21Q3ZAQ7 AC026271.2-201ENST00000428091 497 ntBASIC16.26■□□□□ 0.19
VMA21Q3ZAQ7 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VMA21Q3ZAQ7 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VMA21Q3ZAQ7 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VMA21Q3ZAQ7 MFSD11-216ENST00000590393 1141 ntBASIC16.26■□□□□ 0.19
VMA21Q3ZAQ7 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC16.26■□□□□ 0.19
VMA21Q3ZAQ7 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC16.26■□□□□ 0.19
VMA21Q3ZAQ7 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VMA21Q3ZAQ7 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
VMA21Q3ZAQ7 ADM-207ENST00000530439 1839 ntTSL 2 BASIC16.26■□□□□ 0.19
VMA21Q3ZAQ7 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VMA21Q3ZAQ7 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
VMA21Q3ZAQ7 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VMA21Q3ZAQ7 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VMA21Q3ZAQ7 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VMA21Q3ZAQ7 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC16.25■□□□□ 0.19
VMA21Q3ZAQ7 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VMA21Q3ZAQ7 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VMA21Q3ZAQ7 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VMA21Q3ZAQ7 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC16.25■□□□□ 0.19
VMA21Q3ZAQ7 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
VMA21Q3ZAQ7 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
VMA21Q3ZAQ7 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
VMA21Q3ZAQ7 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VMA21Q3ZAQ7 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
VMA21Q3ZAQ7 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC16.25■□□□□ 0.19
VMA21Q3ZAQ7 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
VMA21Q3ZAQ7 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VMA21Q3ZAQ7 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
VMA21Q3ZAQ7 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
VMA21Q3ZAQ7 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC16.25■□□□□ 0.19
VMA21Q3ZAQ7 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VMA21Q3ZAQ7 USP39-204ENST00000409766 2033 ntTSL 2 BASIC16.24■□□□□ 0.19
VMA21Q3ZAQ7 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC16.24■□□□□ 0.19
VMA21Q3ZAQ7 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VMA21Q3ZAQ7 DPP3P2-201ENST00000416030 1696 ntBASIC16.24■□□□□ 0.19
VMA21Q3ZAQ7 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms