Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.51■□□□□ 0.71
SLC6A12P48065 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.51■□□□□ 0.71
SLC6A12P48065 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC6A12P48065 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.51■□□□□ 0.71
SLC6A12P48065 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC6A12P48065 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
SLC6A12P48065 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
SLC6A12P48065 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
SLC6A12P48065 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC6A12P48065 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.51■□□□□ 0.71
SLC6A12P48065 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC6A12P48065 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SLC6A12P48065 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC6A12P48065 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC6A12P48065 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.5■□□□□ 0.71
SLC6A12P48065 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.5■□□□□ 0.71
SLC6A12P48065 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.5■□□□□ 0.71
SLC6A12P48065 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC6A12P48065 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.5■□□□□ 0.71
SLC6A12P48065 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SLC6A12P48065 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.5■□□□□ 0.71
SLC6A12P48065 AF201337.1-201ENST00000520239 748 ntBASIC19.5■□□□□ 0.71
SLC6A12P48065 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
SLC6A12P48065 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.5■□□□□ 0.71
SLC6A12P48065 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
SLC6A12P48065 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
SLC6A12P48065 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
SLC6A12P48065 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC6A12P48065 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SLC6A12P48065 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
SLC6A12P48065 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC6A12P48065 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.49■□□□□ 0.71
SLC6A12P48065 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
SLC6A12P48065 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SLC6A12P48065 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC6A12P48065 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC6A12P48065 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC6A12P48065 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.49■□□□□ 0.71
SLC6A12P48065 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.49■□□□□ 0.71
SLC6A12P48065 AC105036.2-201ENST00000569468 176 ntBASIC19.49■□□□□ 0.71
SLC6A12P48065 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC6A12P48065 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC6A12P48065 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC6A12P48065 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.49■□□□□ 0.71
SLC6A12P48065 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC6A12P48065 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC6A12P48065 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SLC6A12P48065 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC6A12P48065 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC6A12P48065 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
SLC6A12P48065 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC6A12P48065 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC6A12P48065 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SLC6A12P48065 MKRN4P-201ENST00000444706 1521 ntBASIC19.48■□□□□ 0.71
SLC6A12P48065 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC6A12P48065 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SLC6A12P48065 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.48■□□□□ 0.71
SLC6A12P48065 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.48■□□□□ 0.71
SLC6A12P48065 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.48■□□□□ 0.71
SLC6A12P48065 C2orf69P4-201ENST00000565394 541 ntBASIC19.48■□□□□ 0.71
SLC6A12P48065 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC6A12P48065 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.48■□□□□ 0.71
SLC6A12P48065 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC6A12P48065 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.48■□□□□ 0.71
SLC6A12P48065 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC6A12P48065 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.47■□□□□ 0.71
SLC6A12P48065 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.47■□□□□ 0.71
SLC6A12P48065 PCDHAC2-203ENST00000615316 3011 ntBASIC19.47■□□□□ 0.71
SLC6A12P48065 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.47■□□□□ 0.71
SLC6A12P48065 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC6A12P48065 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.47■□□□□ 0.71
SLC6A12P48065 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SLC6A12P48065 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.47■□□□□ 0.71
SLC6A12P48065 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.47■□□□□ 0.71
SLC6A12P48065 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SLC6A12P48065 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.47■□□□□ 0.71
SLC6A12P48065 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.47■□□□□ 0.71
SLC6A12P48065 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC6A12P48065 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.47■□□□□ 0.71
SLC6A12P48065 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.47■□□□□ 0.71
SLC6A12P48065 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.47■□□□□ 0.71
SLC6A12P48065 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SLC6A12P48065 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC6A12P48065 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.46■□□□□ 0.71
SLC6A12P48065 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SLC6A12P48065 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
SLC6A12P48065 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.46■□□□□ 0.71
SLC6A12P48065 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.46■□□□□ 0.71
SLC6A12P48065 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.46■□□□□ 0.71
SLC6A12P48065 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SLC6A12P48065 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC6A12P48065 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.46■□□□□ 0.71
SLC6A12P48065 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SLC6A12P48065 AL691432.2-201ENST00000607222 2038 ntBASIC19.46■□□□□ 0.71
SLC6A12P48065 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
SLC6A12P48065 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC6A12P48065 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC6A12P48065 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.45■□□□□ 0.7
SLC6A12P48065 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC6A12P48065 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms