Protein–RNA interactions for Protein: P33400

RIM101, pH-response transcription factor pacC/RIM101, yeastyeast

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RIM101P33400 tQ(UUG)CtQ(UUG)C 72 nt4.24□□□□□ -1.73
RIM101P33400 tQ(UUG)D1tQ(UUG)D1 72 nt4.24□□□□□ -1.73
RIM101P33400 tQ(UUG)D2tQ(UUG)D2 72 nt4.24□□□□□ -1.73
RIM101P33400 tQ(UUG)D3tQ(UUG)D3 72 nt4.24□□□□□ -1.73
RIM101P33400 tQ(UUG)E1tQ(UUG)E1 72 nt4.24□□□□□ -1.73
RIM101P33400 tQ(UUG)HtQ(UUG)H 72 nt4.24□□□□□ -1.73
RIM101P33400 tQ(UUG)LtQ(UUG)L 72 nt4.24□□□□□ -1.73
RIM101P33400 DCP2YNL118C 2913 nt4.24□□□□□ -1.73
RIM101P33400 GCV2YMR189W 3105 nt4.23□□□□□ -1.73
RIM101P33400 SNC1YAL030W 354 nt4.23□□□□□ -1.73
RIM101P33400 SMC2YFR031C 3513 nt4.22□□□□□ -1.73
RIM101P33400 tL(UAG)JtL(UAG)J 82 nt4.22□□□□□ -1.73
RIM101P33400 tL(UAG)L1tL(UAG)L1 82 nt4.22□□□□□ -1.73
RIM101P33400 tL(UAG)L2tL(UAG)L2 82 nt4.22□□□□□ -1.73
RIM101P33400 tM(CAU)Q2tM(CAU)Q2 78 nt4.22□□□□□ -1.73
RIM101P33400 YAL064W-BYAL064W-B 381 nt4.22□□□□□ -1.73
RIM101P33400 VTC3YPL019C 2508 nt4.22□□□□□ -1.73
RIM101P33400 YPL150WYPL150W 2706 nt4.22□□□□□ -1.73
RIM101P33400 ZDS2YML109W 2829 nt4.22□□□□□ -1.73
RIM101P33400 VMR1YHL035C 4779 nt4.21□□□□□ -1.73
RIM101P33400 MET6YER091C 2304 nt4.21□□□□□ -1.74
RIM101P33400 KRE5YOR336W 4098 nt4.21□□□□□ -1.74
RIM101P33400 MTC4YBR255W 2085 nt4.21□□□□□ -1.74
RIM101P33400 VPS16YPL045W 2397 nt4.21□□□□□ -1.74
RIM101P33400 ATG11YPR049C 3537 nt4.21□□□□□ -1.74
RIM101P33400 SET1YHR119W 3243 nt4.21□□□□□ -1.74
RIM101P33400 MMS22YLR320W 4365 nt4.21□□□□□ -1.74
RIM101P33400 FYV10YIL097W 1551 nt4.2□□□□□ -1.74
RIM101P33400 MLH1YMR167W 2310 nt4.2□□□□□ -1.74
RIM101P33400 RPS22AYJL190C 393 nt4.2□□□□□ -1.74
RIM101P33400 YBL039C-AYBL039C-A 84 nt4.2□□□□□ -1.74
RIM101P33400 YBL071C-BYBL071C-B 99 nt4.2□□□□□ -1.74
RIM101P33400 XRS2YDR369C 2565 nt4.2□□□□□ -1.74
RIM101P33400 PHO91YNR013C 2685 nt4.19□□□□□ -1.74
RIM101P33400 DAN4YJR151C 3486 nt4.19□□□□□ -1.74
RIM101P33400 MGM1YOR211C 2646 nt4.19□□□□□ -1.74
RIM101P33400 GLC3YEL011W 2115 nt4.18□□□□□ -1.74
RIM101P33400 YJR112W-AYJR112W-A 330 nt4.18□□□□□ -1.74
RIM101P33400 NUP159YIL115C 4383 nt4.18□□□□□ -1.74
RIM101P33400 ALK1YGL021W 2283 nt4.17□□□□□ -1.74
RIM101P33400 NEW1YPL226W 3591 nt4.17□□□□□ -1.74
RIM101P33400 APL2YKL135C 2181 nt4.17□□□□□ -1.74
RIM101P33400 YDR521WYDR521W 336 nt4.16□□□□□ -1.74
RIM101P33400 YMR175W-AYMR175W-A 195 nt4.16□□□□□ -1.74
RIM101P33400 NOP14YDL148C 2433 nt4.16□□□□□ -1.74
RIM101P33400 PSK1YAL017W 4071 nt4.16□□□□□ -1.74
RIM101P33400 ENV11YGR071C 2583 nt4.15□□□□□ -1.74
RIM101P33400 ENA5YDR038C 3276 nt4.15□□□□□ -1.74
RIM101P33400 ENA2YDR039C 3276 nt4.15□□□□□ -1.74
RIM101P33400 ENA1YDR040C 3276 nt4.15□□□□□ -1.74
RIM101P33400 SWR1YDR334W 4545 nt4.15□□□□□ -1.75
RIM101P33400 BIR1YJR089W 2865 nt4.14□□□□□ -1.75
RIM101P33400 RSF2YJR127C 4143 nt4.14□□□□□ -1.75
RIM101P33400 KIN2YLR096W 3444 nt4.14□□□□□ -1.75
RIM101P33400 YBR225WYBR225W 2703 nt4.13□□□□□ -1.75
RIM101P33400 tS(AGA)D3tS(AGA)D3 83 nt4.13□□□□□ -1.75
RIM101P33400 RDN5-1RDN5-1 121 nt4.13□□□□□ -1.75
RIM101P33400 RDN5-6RDN5-6 121 nt4.13□□□□□ -1.75
RIM101P33400 BFR2YDR299W 1605 nt4.13□□□□□ -1.75
RIM101P33400 CHD1YER164W 4407 nt4.12□□□□□ -1.75
RIM101P33400 YOR394C-AYOR394C-A 168 nt4.12□□□□□ -1.75
RIM101P33400 RPA135YPR010C 3612 nt4.12□□□□□ -1.75
RIM101P33400 SPT6YGR116W 4356 nt4.11□□□□□ -1.75
RIM101P33400 DSE4YNR067C 3354 nt4.11□□□□□ -1.75
RIM101P33400 MMS1YPR164W 4224 nt4.11□□□□□ -1.75
RIM101P33400 TAF2YCR042C 4224 nt4.11□□□□□ -1.75
RIM101P33400 APE2YKL157W 2859 nt4.11□□□□□ -1.75
RIM101P33400 RPO31YOR116C 4383 nt4.1□□□□□ -1.75
RIM101P33400 YGR240C-AYGR240C-A 201 nt4.1□□□□□ -1.75
RIM101P33400 UBP1YDL122W 2430 nt4.09□□□□□ -1.75
RIM101P33400 SDC25YLL016W 3147 nt4.07□□□□□ -1.76
RIM101P33400 RPL37BYDR500C 267 nt4.07□□□□□ -1.76
RIM101P33400 YBR109W-AYBR109W-A 225 nt4.07□□□□□ -1.76
RIM101P33400 UBP15YMR304W 3693 nt4.07□□□□□ -1.76
RIM101P33400 KAP120YPL125W 3099 nt4.07□□□□□ -1.76
RIM101P33400 CDC53YDL132W 2448 nt4.06□□□□□ -1.76
RIM101P33400 OSH3YHR073W 2991 nt4.06□□□□□ -1.76
RIM101P33400 ALA1YOR335C 2877 nt4.06□□□□□ -1.76
RIM101P33400 TAH1YCR060W 336 nt4.06□□□□□ -1.76
RIM101P33400 YER078W-AYER078W-A 165 nt4.06□□□□□ -1.76
RIM101P33400 RPO41YFL036W 4056 nt4.06□□□□□ -1.76
RIM101P33400 RGR1YLR071C 3249 nt4.06□□□□□ -1.76
RIM101P33400 SEC1YDR164C 2175 nt4.05□□□□□ -1.76
RIM101P33400 YOL164W-AYOL164W-A 183 nt4.05□□□□□ -1.76
RIM101P33400 snR50snR50 90 nt4.05□□□□□ -1.76
RIM101P33400 YJL127W-AYJL127W-A 117 nt4.04□□□□□ -1.76
RIM101P33400 COG6YNL041C 2520 nt4.04□□□□□ -1.76
RIM101P33400 ISW1YBR245C 3390 nt4.03□□□□□ -1.76
RIM101P33400 snR64snR64 101 nt4.03□□□□□ -1.76
RIM101P33400 YDR464C-AYDR464C-A 189 nt4.03□□□□□ -1.76
RIM101P33400 YGL123C-AYGL123C-A 231 nt4.03□□□□□ -1.76
RIM101P33400 TMA17YDL110C 453 nt4.02□□□□□ -1.77
RIM101P33400 YKL100W-AYKL100W-A 90 nt4.02□□□□□ -1.77
RIM101P33400 MAK10YEL053C 2202 nt4.02□□□□□ -1.77
RIM101P33400 YGR067CYGR067C 2415 nt4.02□□□□□ -1.77
RIM101P33400 ROM1YGR070W 3468 nt4.01□□□□□ -1.77
RIM101P33400 PKH2YOL100W 3246 nt4.01□□□□□ -1.77
RIM101P33400 YBT1YLL048C 4986 nt4.01□□□□□ -1.77
RIM101P33400 NFT1YKR103W 3657 nt4.01□□□□□ -1.77
RIM101P33400 COG4YPR105C 2586 nt4.01□□□□□ -1.77
Retrieved 100 of 7,029 protein–RNA pairs in 129.8 ms