Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TcraP01849 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
TcraP01849 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TcraP01849 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TcraP01849 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
TcraP01849 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
TcraP01849 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
TcraP01849 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TcraP01849 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TcraP01849 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TcraP01849 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TcraP01849 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TcraP01849 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TcraP01849 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TcraP01849 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TcraP01849 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TcraP01849 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC12.8□□□□□ -0.36
TcraP01849 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC12.8□□□□□ -0.36
TcraP01849 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TcraP01849 Appbp2os-202ENSMUST00000206972 447 ntBASIC12.8□□□□□ -0.36
TcraP01849 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TcraP01849 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
TcraP01849 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TcraP01849 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TcraP01849 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TcraP01849 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TcraP01849 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TcraP01849 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
TcraP01849 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TcraP01849 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TcraP01849 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
TcraP01849 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TcraP01849 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TcraP01849 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
TcraP01849 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TcraP01849 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TcraP01849 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
TcraP01849 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TcraP01849 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TcraP01849 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TcraP01849 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TcraP01849 Gm7860-201ENSMUST00000121190 879 ntBASIC12.79□□□□□ -0.36
TcraP01849 Gm11421-201ENSMUST00000122124 294 ntBASIC12.79□□□□□ -0.36
TcraP01849 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TcraP01849 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TcraP01849 AC137127.1-201ENSMUST00000213466 1078 ntBASIC12.79□□□□□ -0.36
TcraP01849 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TcraP01849 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TcraP01849 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC12.79□□□□□ -0.36
TcraP01849 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TcraP01849 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TcraP01849 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TcraP01849 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TcraP01849 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TcraP01849 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TcraP01849 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TcraP01849 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TcraP01849 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TcraP01849 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TcraP01849 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TcraP01849 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TcraP01849 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
TcraP01849 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TcraP01849 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TcraP01849 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TcraP01849 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TcraP01849 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC12.78□□□□□ -0.36
TcraP01849 Gm21956-201ENSMUST00000179946 522 ntBASIC12.78□□□□□ -0.36
TcraP01849 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC12.78□□□□□ -0.36
TcraP01849 Gm8493-201ENSMUST00000196881 489 ntBASIC12.78□□□□□ -0.36
TcraP01849 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TcraP01849 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TcraP01849 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TcraP01849 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TcraP01849 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
TcraP01849 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TcraP01849 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TcraP01849 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TcraP01849 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TcraP01849 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TcraP01849 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TcraP01849 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
TcraP01849 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TcraP01849 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TcraP01849 Tgds-204ENSMUST00000228543 1594 ntBASIC12.77□□□□□ -0.36
TcraP01849 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TcraP01849 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TcraP01849 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TcraP01849 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
TcraP01849 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TcraP01849 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TcraP01849 Gm12251-201ENSMUST00000117893 792 ntBASIC12.77□□□□□ -0.37
TcraP01849 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
TcraP01849 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC12.77□□□□□ -0.37
TcraP01849 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TcraP01849 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TcraP01849 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TcraP01849 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.77□□□□□ -0.37
TcraP01849 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TcraP01849 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms