Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.95■□□□□ 0.46
Syn1O88935 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Syn1O88935 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Syn1O88935 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Syn1O88935 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Syn1O88935 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Syn1O88935 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Syn1O88935 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Syn1O88935 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Syn1O88935 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Syn1O88935 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Syn1O88935 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Syn1O88935 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Syn1O88935 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Syn1O88935 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Syn1O88935 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Syn1O88935 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Syn1O88935 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Syn1O88935 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Syn1O88935 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Syn1O88935 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Syn1O88935 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Syn1O88935 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Syn1O88935 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Syn1O88935 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Syn1O88935 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Syn1O88935 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.94■□□□□ 0.46
Syn1O88935 Gm10052-201ENSMUST00000168019 960 ntBASIC17.94■□□□□ 0.46
Syn1O88935 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Syn1O88935 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Syn1O88935 Gm7729-201ENSMUST00000050143 801 ntBASIC17.94■□□□□ 0.46
Syn1O88935 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Syn1O88935 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Syn1O88935 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Syn1O88935 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Syn1O88935 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.94■□□□□ 0.46
Syn1O88935 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Syn1O88935 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Syn1O88935 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Syn1O88935 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Syn1O88935 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Syn1O88935 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Syn1O88935 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Syn1O88935 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Syn1O88935 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC17.93■□□□□ 0.46
Syn1O88935 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Syn1O88935 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Syn1O88935 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Syn1O88935 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Syn1O88935 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Syn1O88935 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Syn1O88935 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.93■□□□□ 0.46
Syn1O88935 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.92■□□□□ 0.46
Syn1O88935 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Syn1O88935 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Syn1O88935 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Syn1O88935 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Syn1O88935 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.92■□□□□ 0.46
Syn1O88935 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Syn1O88935 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Syn1O88935 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Syn1O88935 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Syn1O88935 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC17.92■□□□□ 0.46
Syn1O88935 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Syn1O88935 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.92■□□□□ 0.46
Syn1O88935 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Syn1O88935 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Syn1O88935 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Syn1O88935 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Syn1O88935 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Syn1O88935 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Syn1O88935 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Syn1O88935 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Syn1O88935 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Syn1O88935 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
Syn1O88935 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.91■□□□□ 0.46
Syn1O88935 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Syn1O88935 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Syn1O88935 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.91■□□□□ 0.46
Syn1O88935 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Syn1O88935 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Syn1O88935 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Syn1O88935 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Syn1O88935 Gm37722-201ENSMUST00000193757 208 ntBASIC17.91■□□□□ 0.46
Syn1O88935 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Syn1O88935 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.91■□□□□ 0.46
Syn1O88935 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Syn1O88935 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Syn1O88935 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Syn1O88935 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.91■□□□□ 0.46
Syn1O88935 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Syn1O88935 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Syn1O88935 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Syn1O88935 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC17.91■□□□□ 0.46
Syn1O88935 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Syn1O88935 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Syn1O88935 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.91■□□□□ 0.46
Syn1O88935 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Syn1O88935 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Syn1O88935 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms