Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRICKLE3O43900 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
PRICKLE3O43900 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRICKLE3O43900 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRICKLE3O43900 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PRICKLE3O43900 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRICKLE3O43900 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
PRICKLE3O43900 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
PRICKLE3O43900 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.38■□□□□ 0.69
PRICKLE3O43900 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.38■□□□□ 0.69
PRICKLE3O43900 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.38■□□□□ 0.69
PRICKLE3O43900 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.38■□□□□ 0.69
PRICKLE3O43900 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRICKLE3O43900 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.38■□□□□ 0.69
PRICKLE3O43900 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
PRICKLE3O43900 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
PRICKLE3O43900 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PRICKLE3O43900 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
PRICKLE3O43900 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRICKLE3O43900 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRICKLE3O43900 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRICKLE3O43900 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
PRICKLE3O43900 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PRICKLE3O43900 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.37■□□□□ 0.69
PRICKLE3O43900 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
PRICKLE3O43900 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.37■□□□□ 0.69
PRICKLE3O43900 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRICKLE3O43900 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRICKLE3O43900 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.37■□□□□ 0.69
PRICKLE3O43900 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.37■□□□□ 0.69
PRICKLE3O43900 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.37■□□□□ 0.69
PRICKLE3O43900 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.37■□□□□ 0.69
PRICKLE3O43900 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.37■□□□□ 0.69
PRICKLE3O43900 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
PRICKLE3O43900 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRICKLE3O43900 AL162377.1-201ENST00000618844 1793 ntBASIC19.37■□□□□ 0.69
PRICKLE3O43900 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRICKLE3O43900 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.36■□□□□ 0.69
PRICKLE3O43900 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.36■□□□□ 0.69
PRICKLE3O43900 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
PRICKLE3O43900 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRICKLE3O43900 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
PRICKLE3O43900 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRICKLE3O43900 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRICKLE3O43900 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRICKLE3O43900 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.36■□□□□ 0.69
PRICKLE3O43900 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PRICKLE3O43900 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.36■□□□□ 0.69
PRICKLE3O43900 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRICKLE3O43900 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PRICKLE3O43900 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRICKLE3O43900 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRICKLE3O43900 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.36■□□□□ 0.69
PRICKLE3O43900 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.36■□□□□ 0.69
PRICKLE3O43900 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.36■□□□□ 0.69
PRICKLE3O43900 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.36■□□□□ 0.69
PRICKLE3O43900 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PRICKLE3O43900 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.36■□□□□ 0.69
PRICKLE3O43900 MIR4651-201ENST00000582622 73 ntBASIC19.36■□□□□ 0.69
PRICKLE3O43900 AC008403.3-201ENST00000598924 454 ntBASIC19.36■□□□□ 0.69
PRICKLE3O43900 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRICKLE3O43900 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRICKLE3O43900 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.36■□□□□ 0.69
PRICKLE3O43900 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
PRICKLE3O43900 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.36■□□□□ 0.69
PRICKLE3O43900 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRICKLE3O43900 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRICKLE3O43900 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRICKLE3O43900 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.35■□□□□ 0.69
PRICKLE3O43900 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PRICKLE3O43900 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRICKLE3O43900 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.35■□□□□ 0.69
PRICKLE3O43900 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRICKLE3O43900 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.35■□□□□ 0.69
PRICKLE3O43900 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.35■□□□□ 0.69
PRICKLE3O43900 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.35■□□□□ 0.69
PRICKLE3O43900 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.35■□□□□ 0.69
PRICKLE3O43900 AL031963.3-201ENST00000606441 850 ntBASIC19.35■□□□□ 0.69
PRICKLE3O43900 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.35■□□□□ 0.69
PRICKLE3O43900 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRICKLE3O43900 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRICKLE3O43900 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRICKLE3O43900 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.35■□□□□ 0.69
PRICKLE3O43900 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRICKLE3O43900 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRICKLE3O43900 SMG8-203ENST00000578922 2178 ntBASIC19.34■□□□□ 0.69
PRICKLE3O43900 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRICKLE3O43900 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRICKLE3O43900 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
PRICKLE3O43900 KRT8P17-201ENST00000453110 1448 ntBASIC19.34■□□□□ 0.69
PRICKLE3O43900 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRICKLE3O43900 AL157384.1-201ENST00000445995 2473 ntBASIC19.34■□□□□ 0.69
PRICKLE3O43900 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PRICKLE3O43900 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRICKLE3O43900 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRICKLE3O43900 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.34■□□□□ 0.69
PRICKLE3O43900 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRICKLE3O43900 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRICKLE3O43900 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PRICKLE3O43900 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms