Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KDELR3O43731 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
KDELR3O43731 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
KDELR3O43731 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.5■□□□□ 0.87
KDELR3O43731 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
KDELR3O43731 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KDELR3O43731 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KDELR3O43731 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
KDELR3O43731 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KDELR3O43731 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.5■□□□□ 0.87
KDELR3O43731 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
KDELR3O43731 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KDELR3O43731 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.49■□□□□ 0.87
KDELR3O43731 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KDELR3O43731 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.49■□□□□ 0.87
KDELR3O43731 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.49■□□□□ 0.87
KDELR3O43731 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.49■□□□□ 0.87
KDELR3O43731 KRT8P17-201ENST00000453110 1448 ntBASIC20.49■□□□□ 0.87
KDELR3O43731 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
KDELR3O43731 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.49■□□□□ 0.87
KDELR3O43731 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KDELR3O43731 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KDELR3O43731 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KDELR3O43731 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KDELR3O43731 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
KDELR3O43731 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
KDELR3O43731 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KDELR3O43731 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KDELR3O43731 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.48■□□□□ 0.87
KDELR3O43731 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.48■□□□□ 0.87
KDELR3O43731 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.48■□□□□ 0.87
KDELR3O43731 UNC93B4-201ENST00000505679 747 ntBASIC20.48■□□□□ 0.87
KDELR3O43731 MIR4651-201ENST00000582622 73 ntBASIC20.48■□□□□ 0.87
KDELR3O43731 AL031963.3-201ENST00000606441 850 ntBASIC20.48■□□□□ 0.87
KDELR3O43731 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.48■□□□□ 0.87
KDELR3O43731 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KDELR3O43731 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.48■□□□□ 0.87
KDELR3O43731 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
KDELR3O43731 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KDELR3O43731 SMG8-203ENST00000578922 2178 ntBASIC20.48■□□□□ 0.87
KDELR3O43731 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
KDELR3O43731 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
KDELR3O43731 KRT8P20-201ENST00000423953 1409 ntBASIC20.47■□□□□ 0.87
KDELR3O43731 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.47■□□□□ 0.87
KDELR3O43731 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KDELR3O43731 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
KDELR3O43731 HLA-G-202ENST00000376815 851 ntBASIC20.47■□□□□ 0.87
KDELR3O43731 HLA-G-203ENST00000376818 1127 ntBASIC20.47■□□□□ 0.87
KDELR3O43731 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.47■□□□□ 0.87
KDELR3O43731 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.47■□□□□ 0.87
KDELR3O43731 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
KDELR3O43731 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.47■□□□□ 0.87
KDELR3O43731 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.47■□□□□ 0.87
KDELR3O43731 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
KDELR3O43731 AC006557.6-201ENST00000623071 864 ntBASIC20.47■□□□□ 0.87
KDELR3O43731 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KDELR3O43731 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KDELR3O43731 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.47■□□□□ 0.87
KDELR3O43731 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KDELR3O43731 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
KDELR3O43731 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KDELR3O43731 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
KDELR3O43731 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KDELR3O43731 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.46■□□□□ 0.87
KDELR3O43731 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
KDELR3O43731 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KDELR3O43731 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.46■□□□□ 0.87
KDELR3O43731 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.46■□□□□ 0.87
KDELR3O43731 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
KDELR3O43731 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KDELR3O43731 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
KDELR3O43731 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.46■□□□□ 0.87
KDELR3O43731 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
KDELR3O43731 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
KDELR3O43731 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
KDELR3O43731 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KDELR3O43731 SOX15-203ENST00000570788 1093 ntBASIC20.46■□□□□ 0.87
KDELR3O43731 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.46■□□□□ 0.87
KDELR3O43731 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
KDELR3O43731 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.46■□□□□ 0.87
KDELR3O43731 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.46■□□□□ 0.87
KDELR3O43731 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.46■□□□□ 0.87
KDELR3O43731 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
KDELR3O43731 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
KDELR3O43731 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
KDELR3O43731 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
KDELR3O43731 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KDELR3O43731 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
KDELR3O43731 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
KDELR3O43731 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
KDELR3O43731 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.45■□□□□ 0.86
KDELR3O43731 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
KDELR3O43731 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
KDELR3O43731 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
KDELR3O43731 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
KDELR3O43731 AC026366.1-201ENST00000488803 879 ntBASIC20.45■□□□□ 0.86
KDELR3O43731 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.45■□□□□ 0.86
KDELR3O43731 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.45■□□□□ 0.86
KDELR3O43731 AC008403.3-201ENST00000598924 454 ntBASIC20.45■□□□□ 0.86
KDELR3O43731 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms