Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COPEO14579 AL691432.2-201ENST00000607222 2038 ntBASIC20.14■□□□□ 0.81
COPEO14579 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COPEO14579 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.14■□□□□ 0.81
COPEO14579 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
COPEO14579 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.13■□□□□ 0.81
COPEO14579 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
COPEO14579 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.13■□□□□ 0.81
COPEO14579 AC008406.3-201ENST00000620001 1374 ntBASIC20.13■□□□□ 0.81
COPEO14579 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
COPEO14579 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
COPEO14579 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
COPEO14579 AC010141.2-201ENST00000452426 721 ntBASIC20.13■□□□□ 0.81
COPEO14579 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.13■□□□□ 0.81
COPEO14579 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
COPEO14579 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COPEO14579 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COPEO14579 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COPEO14579 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.12■□□□□ 0.81
COPEO14579 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
COPEO14579 KRT8P36-201ENST00000489121 1440 ntBASIC20.12■□□□□ 0.81
COPEO14579 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
COPEO14579 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COPEO14579 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COPEO14579 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.12■□□□□ 0.81
COPEO14579 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
COPEO14579 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.12■□□□□ 0.81
COPEO14579 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.12■□□□□ 0.81
COPEO14579 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.12■□□□□ 0.81
COPEO14579 AL358852.1-201ENST00000623174 1268 ntBASIC20.12■□□□□ 0.81
COPEO14579 AL136967.2-201ENST00000623968 743 ntBASIC20.12■□□□□ 0.81
COPEO14579 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COPEO14579 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
COPEO14579 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COPEO14579 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
COPEO14579 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COPEO14579 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
COPEO14579 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COPEO14579 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.11■□□□□ 0.81
COPEO14579 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
COPEO14579 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
COPEO14579 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COPEO14579 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.11■□□□□ 0.81
COPEO14579 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
COPEO14579 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.11■□□□□ 0.81
COPEO14579 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COPEO14579 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.11■□□□□ 0.81
COPEO14579 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
COPEO14579 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.11■□□□□ 0.81
COPEO14579 MIR6084-201ENST00000622012 110 ntBASIC20.11■□□□□ 0.81
COPEO14579 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.11■□□□□ 0.81
COPEO14579 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COPEO14579 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
COPEO14579 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COPEO14579 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.11■□□□□ 0.81
COPEO14579 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COPEO14579 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
COPEO14579 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.1■□□□□ 0.81
COPEO14579 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
COPEO14579 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COPEO14579 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
COPEO14579 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COPEO14579 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.1■□□□□ 0.81
COPEO14579 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COPEO14579 SLC7A5P2-201ENST00000553010 536 ntBASIC20.1■□□□□ 0.81
COPEO14579 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COPEO14579 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COPEO14579 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
COPEO14579 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COPEO14579 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
COPEO14579 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
COPEO14579 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COPEO14579 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.1■□□□□ 0.81
COPEO14579 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
COPEO14579 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COPEO14579 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COPEO14579 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.1■□□□□ 0.81
COPEO14579 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COPEO14579 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.09■□□□□ 0.81
COPEO14579 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.09■□□□□ 0.81
COPEO14579 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COPEO14579 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COPEO14579 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
COPEO14579 BX119927.1-201ENST00000636596 1552 ntBASIC20.09■□□□□ 0.81
COPEO14579 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COPEO14579 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COPEO14579 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COPEO14579 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.09■□□□□ 0.81
COPEO14579 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COPEO14579 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.09■□□□□ 0.81
COPEO14579 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.09■□□□□ 0.81
COPEO14579 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COPEO14579 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COPEO14579 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
COPEO14579 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
COPEO14579 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.09■□□□□ 0.81
COPEO14579 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COPEO14579 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
COPEO14579 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COPEO14579 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms