Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
O00370 AC142086.2-201ENST00000569753 217 ntBASIC21.52■■□□□ 1.04
O00370 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.52■■□□□ 1.04
O00370 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
O00370 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.52■■□□□ 1.04
O00370 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
O00370 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.52■■□□□ 1.04
O00370 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.52■■□□□ 1.04
O00370 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
O00370 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.52■■□□□ 1.03
O00370 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.52■■□□□ 1.03
O00370 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
O00370 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.51■■□□□ 1.03
O00370 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.51■■□□□ 1.03
O00370 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
O00370 AC020907.5-201ENST00000624372 1936 ntBASIC21.51■■□□□ 1.03
O00370 AC092720.2-201ENST00000602388 1665 ntBASIC21.51■■□□□ 1.03
O00370 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
O00370 AC098934.4-201ENST00000564127 592 ntBASIC21.51■■□□□ 1.03
O00370 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
O00370 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
O00370 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
O00370 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
O00370 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
O00370 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
O00370 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.5■■□□□ 1.03
O00370 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.5■■□□□ 1.03
O00370 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
O00370 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.5■■□□□ 1.03
O00370 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
O00370 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
O00370 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.5■■□□□ 1.03
O00370 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
O00370 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.5■■□□□ 1.03
O00370 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.5■■□□□ 1.03
O00370 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
O00370 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
O00370 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
O00370 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.5■■□□□ 1.03
O00370 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.5■■□□□ 1.03
O00370 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
O00370 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
O00370 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
O00370 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
O00370 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
O00370 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.49■■□□□ 1.03
O00370 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.49■■□□□ 1.03
O00370 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
O00370 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
O00370 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
O00370 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
O00370 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
O00370 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.49■■□□□ 1.03
O00370 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.49■■□□□ 1.03
O00370 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.49■■□□□ 1.03
O00370 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
O00370 MIR4758-201ENST00000577688 71 ntBASIC21.49■■□□□ 1.03
O00370 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
O00370 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.49■■□□□ 1.03
O00370 AL512408.1-201ENST00000569378 2000 ntBASIC21.49■■□□□ 1.03
O00370 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.49■■□□□ 1.03
O00370 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
O00370 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
O00370 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.49■■□□□ 1.03
O00370 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
O00370 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
O00370 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.48■■□□□ 1.03
O00370 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
O00370 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.48■■□□□ 1.03
O00370 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
O00370 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
O00370 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
O00370 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
O00370 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
O00370 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
O00370 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
O00370 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.48■■□□□ 1.03
O00370 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
O00370 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
O00370 AC112907.3-201ENST00000577781 2400 ntBASIC21.47■■□□□ 1.03
O00370 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
O00370 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
O00370 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
O00370 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
O00370 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.47■■□□□ 1.03
O00370 DUSP5P2-201ENST00000426873 1033 ntBASIC21.47■■□□□ 1.03
O00370 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.47■■□□□ 1.03
O00370 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.47■■□□□ 1.03
O00370 C2orf69P4-201ENST00000565394 541 ntBASIC21.47■■□□□ 1.03
O00370 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.47■■□□□ 1.03
O00370 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.47■■□□□ 1.03
O00370 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
O00370 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.47■■□□□ 1.03
O00370 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.47■■□□□ 1.03
O00370 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
O00370 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
O00370 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
O00370 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
O00370 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
O00370 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms