Protein–RNA interactions for Protein: A6NKG5

RTL1, Retrotransposon-like protein 1, humanhuman

Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1A6NKG5 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC26.96■■□□□ 1.91
RTL1A6NKG5 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
RTL1A6NKG5 AL353807.1-201ENST00000427475 662 ntBASIC26.96■■□□□ 1.91
RTL1A6NKG5 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC26.96■■□□□ 1.91
RTL1A6NKG5 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
RTL1A6NKG5 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC26.96■■□□□ 1.91
RTL1A6NKG5 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC26.96■■□□□ 1.91
RTL1A6NKG5 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC26.96■■□□□ 1.91
RTL1A6NKG5 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC26.96■■□□□ 1.91
RTL1A6NKG5 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
RTL1A6NKG5 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
RTL1A6NKG5 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
RTL1A6NKG5 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.9
RTL1A6NKG5 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
RTL1A6NKG5 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
RTL1A6NKG5 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.9
RTL1A6NKG5 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.9
RTL1A6NKG5 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC26.95■■□□□ 1.9
RTL1A6NKG5 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
RTL1A6NKG5 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC26.95■■□□□ 1.9
RTL1A6NKG5 REXO1L12P-201ENST00000622156 912 ntBASIC26.95■■□□□ 1.9
RTL1A6NKG5 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
RTL1A6NKG5 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC26.94■■□□□ 1.9
RTL1A6NKG5 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
RTL1A6NKG5 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
RTL1A6NKG5 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
RTL1A6NKG5 NBPF21P-201ENST00000425093 1451 ntBASIC26.94■■□□□ 1.9
RTL1A6NKG5 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC26.94■■□□□ 1.9
RTL1A6NKG5 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC26.94■■□□□ 1.9
RTL1A6NKG5 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC26.94■■□□□ 1.9
RTL1A6NKG5 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
RTL1A6NKG5 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC26.94■■□□□ 1.9
RTL1A6NKG5 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC26.94■■□□□ 1.9
RTL1A6NKG5 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC26.94■■□□□ 1.9
RTL1A6NKG5 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC26.94■■□□□ 1.9
RTL1A6NKG5 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC26.94■■□□□ 1.9
RTL1A6NKG5 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC26.94■■□□□ 1.9
RTL1A6NKG5 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC26.94■■□□□ 1.9
RTL1A6NKG5 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC26.94■■□□□ 1.9
RTL1A6NKG5 AF186192.3-201ENST00000583427 947 ntBASIC26.94■■□□□ 1.9
RTL1A6NKG5 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
RTL1A6NKG5 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC26.94■■□□□ 1.9
RTL1A6NKG5 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
RTL1A6NKG5 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC26.93■■□□□ 1.9
RTL1A6NKG5 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
RTL1A6NKG5 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC26.93■■□□□ 1.9
RTL1A6NKG5 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC26.93■■□□□ 1.9
RTL1A6NKG5 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
RTL1A6NKG5 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC26.93■■□□□ 1.9
RTL1A6NKG5 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
RTL1A6NKG5 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC26.93■■□□□ 1.9
RTL1A6NKG5 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
RTL1A6NKG5 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
RTL1A6NKG5 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
RTL1A6NKG5 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC26.93■■□□□ 1.9
RTL1A6NKG5 AC087499.1-201ENST00000418141 1075 ntBASIC26.93■■□□□ 1.9
RTL1A6NKG5 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
RTL1A6NKG5 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC26.93■■□□□ 1.9
RTL1A6NKG5 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC26.93■■□□□ 1.9
RTL1A6NKG5 FBXW4P1-201ENST00000426721 2239 ntBASIC26.92■■□□□ 1.9
RTL1A6NKG5 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
RTL1A6NKG5 AC121338.2-201ENST00000622535 1744 ntBASIC26.92■■□□□ 1.9
RTL1A6NKG5 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
RTL1A6NKG5 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
RTL1A6NKG5 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC26.92■■□□□ 1.9
RTL1A6NKG5 FAM210CP-201ENST00000445714 574 ntBASIC26.92■■□□□ 1.9
RTL1A6NKG5 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC26.92■■□□□ 1.9
RTL1A6NKG5 TSPY15P-201ENST00000457163 923 ntBASIC26.92■■□□□ 1.9
RTL1A6NKG5 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC26.92■■□□□ 1.9
RTL1A6NKG5 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC26.92■■□□□ 1.9
RTL1A6NKG5 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC26.92■■□□□ 1.9
RTL1A6NKG5 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
RTL1A6NKG5 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC26.92■■□□□ 1.9
RTL1A6NKG5 LINC00565-201ENST00000562710 2331 ntBASIC26.92■■□□□ 1.9
RTL1A6NKG5 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
RTL1A6NKG5 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC26.91■■□□□ 1.9
RTL1A6NKG5 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
RTL1A6NKG5 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
RTL1A6NKG5 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
RTL1A6NKG5 HTR7P1-201ENST00000538670 1336 ntBASIC26.91■■□□□ 1.9
RTL1A6NKG5 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
RTL1A6NKG5 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
RTL1A6NKG5 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC26.91■■□□□ 1.9
RTL1A6NKG5 RPS15-203ENST00000586096 570 ntTSL 2 BASIC26.91■■□□□ 1.9
RTL1A6NKG5 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC26.91■■□□□ 1.9
RTL1A6NKG5 AL031963.3-201ENST00000606441 850 ntBASIC26.91■■□□□ 1.9
RTL1A6NKG5 AC012306.2-201ENST00000609350 630 ntBASIC26.91■■□□□ 1.9
RTL1A6NKG5 AC026471.5-201ENST00000615068 467 ntBASIC26.91■■□□□ 1.9
RTL1A6NKG5 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC26.91■■□□□ 1.9
RTL1A6NKG5 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
RTL1A6NKG5 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC26.91■■□□□ 1.9
RTL1A6NKG5 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
RTL1A6NKG5 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC26.9■■□□□ 1.9
RTL1A6NKG5 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RTL1A6NKG5 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC26.9■■□□□ 1.9
RTL1A6NKG5 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC26.9■■□□□ 1.9
RTL1A6NKG5 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RTL1A6NKG5 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RTL1A6NKG5 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
RTL1A6NKG5 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC26.9■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms