Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 LGSN-201ENST00000370657 1949 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SNX18Q96RF0 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SNX18Q96RF0 ELAVL2-203ENST00000380117 2370 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
SNX18Q96RF0 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SNX18Q96RF0 CAST-202ENST00000325674 3356 ntTSL 5 BASIC7.34□□□□□ -1.23
SNX18Q96RF0 HAVCR2-201ENST00000307851 2907 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.24
SNX18Q96RF0 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.24
SNX18Q96RF0 SCFD1-202ENST00000396629 2021 ntTSL 2 BASIC7.34□□□□□ -1.24
SNX18Q96RF0 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
SNX18Q96RF0 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SNX18Q96RF0 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC7.33□□□□□ -1.24
SNX18Q96RF0 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC7.33□□□□□ -1.24
SNX18Q96RF0 KCNMB3P1-202ENST00000493696 3389 ntBASIC7.33□□□□□ -1.24
SNX18Q96RF0 BMS1P1-201ENST00000374336 1332 ntBASIC7.33□□□□□ -1.24
SNX18Q96RF0 MTCO1P8-201ENST00000416914 1523 ntBASIC7.33□□□□□ -1.24
SNX18Q96RF0 AC003684.1-201ENST00000432442 1715 ntTSL 2 BASIC7.33□□□□□ -1.24
SNX18Q96RF0 C4orf26-205ENST00000616557 1725 ntTSL 3 BASIC7.33□□□□□ -1.24
SNX18Q96RF0 FBXO30-201ENST00000237281 9009 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SNX18Q96RF0 NUDT13-203ENST00000372997 1919 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SNX18Q96RF0 WDHD1-202ENST00000420358 3722 ntTSL 5 BASIC7.33□□□□□ -1.24
SNX18Q96RF0 IL26-201ENST00000229134 1075 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SNX18Q96RF0 AMTN-201ENST00000339336 1037 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
SNX18Q96RF0 OR2AK2-201ENST00000366480 1154 ntAPPRIS ALT2 BASIC7.33□□□□□ -1.24
SNX18Q96RF0 AC240504.1-201ENST00000395709 845 ntBASIC7.33□□□□□ -1.24
SNX18Q96RF0 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
SNX18Q96RF0 AC074117.1-203ENST00000412749 399 ntTSL 3 BASIC7.33□□□□□ -1.24
SNX18Q96RF0 OCM-202ENST00000416608 623 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
SNX18Q96RF0 AL391863.1-201ENST00000422776 743 ntTSL 3 BASIC7.33□□□□□ -1.24
SNX18Q96RF0 AC034228.1-201ENST00000424244 923 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SNX18Q96RF0 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC7.33□□□□□ -1.24
SNX18Q96RF0 AC009228.1-203ENST00000430105 432 ntTSL 3 BASIC7.33□□□□□ -1.24
SNX18Q96RF0 AL162595.2-201ENST00000430677 792 ntTSL 3 BASIC7.33□□□□□ -1.24
SNX18Q96RF0 AC007683.1-201ENST00000432746 591 ntBASIC7.33□□□□□ -1.24
SNX18Q96RF0 AL117338.1-201ENST00000434552 631 ntTSL 5 BASIC7.33□□□□□ -1.24
SNX18Q96RF0 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC7.33□□□□□ -1.24
SNX18Q96RF0 RPS10P3-201ENST00000439253 494 ntBASIC7.33□□□□□ -1.24
SNX18Q96RF0 AC012454.1-201ENST00000443948 995 ntBASIC7.33□□□□□ -1.24
SNX18Q96RF0 SLC8A1-AS1-207ENST00000444629 935 ntTSL 3 BASIC7.33□□□□□ -1.24
SNX18Q96RF0 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
SNX18Q96RF0 AL109945.1-201ENST00000448134 687 ntTSL 2 BASIC7.33□□□□□ -1.24
SNX18Q96RF0 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC7.33□□□□□ -1.24
SNX18Q96RF0 AL034397.1-201ENST00000456392 908 ntBASIC7.33□□□□□ -1.24
SNX18Q96RF0 AC008026.1-201ENST00000460492 447 ntBASIC7.33□□□□□ -1.24
SNX18Q96RF0 AC117395.3-201ENST00000471176 680 ntTSL 4 BASIC7.33□□□□□ -1.24
SNX18Q96RF0 RN7SL705P-201ENST00000481678 294 ntBASIC7.33□□□□□ -1.24
SNX18Q96RF0 AC108688.1-201ENST00000485817 713 ntBASIC7.33□□□□□ -1.24
SNX18Q96RF0 MYL5-205ENST00000505477 584 ntTSL 3 BASIC7.33□□□□□ -1.24
SNX18Q96RF0 AC025188.1-201ENST00000507514 600 ntTSL 3 BASIC7.33□□□□□ -1.24
SNX18Q96RF0 Z99943.2-201ENST00000507585 266 ntBASIC7.33□□□□□ -1.24
SNX18Q96RF0 LINC02489-201ENST00000527239 354 ntTSL 3 BASIC7.33□□□□□ -1.24
SNX18Q96RF0 AC104031.1-201ENST00000527726 372 ntTSL 2 BASIC7.33□□□□□ -1.24
SNX18Q96RF0 AP000944.1-201ENST00000533886 564 ntTSL 4 BASIC7.33□□□□□ -1.24
SNX18Q96RF0 LINC01588-213ENST00000557142 492 ntTSL 3 BASIC7.33□□□□□ -1.24
SNX18Q96RF0 AC093334.1-201ENST00000559904 423 ntTSL 3 BASIC7.33□□□□□ -1.24
SNX18Q96RF0 AC138907.5-201ENST00000561744 273 ntTSL 5 BASIC7.33□□□□□ -1.24
SNX18Q96RF0 AL023284.4-201ENST00000564248 374 ntBASIC7.33□□□□□ -1.24
SNX18Q96RF0 EIF4A1P9-201ENST00000576035 1207 ntBASIC7.33□□□□□ -1.24
SNX18Q96RF0 MIR3187-201ENST00000583431 70 ntBASIC7.33□□□□□ -1.24
SNX18Q96RF0 ACP5-208ENST00000590420 301 ntTSL 5 BASIC7.33□□□□□ -1.24
SNX18Q96RF0 AC016876.3-201ENST00000610459 426 ntBASIC7.33□□□□□ -1.24
SNX18Q96RF0 Metazoa_SRP.136-201ENST00000614846 283 ntBASIC7.33□□□□□ -1.24
SNX18Q96RF0 UBE2Q2P6-202ENST00000617217 443 ntTSL 5 BASIC7.33□□□□□ -1.24
SNX18Q96RF0 AL512356.3-201ENST00000623005 461 ntBASIC7.33□□□□□ -1.24
SNX18Q96RF0 AL589666.2-201ENST00000624603 618 ntBASIC7.33□□□□□ -1.24
SNX18Q96RF0 RHOXF1P2-201ENST00000635431 502 ntBASIC7.33□□□□□ -1.24
SNX18Q96RF0 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SNX18Q96RF0 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
SNX18Q96RF0 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
SNX18Q96RF0 EYA1-202ENST00000340726 4326 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
SNX18Q96RF0 CNPY1-204ENST00000636446 1637 ntAPPRIS P5 TSL 5 BASIC7.33□□□□□ -1.24
SNX18Q96RF0 MS4A2-204ENST00000617306 3512 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SNX18Q96RF0 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SNX18Q96RF0 NOS2P3-202ENST00000458685 3328 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SNX18Q96RF0 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC7.33□□□□□ -1.24
SNX18Q96RF0 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SNX18Q96RF0 TEX14-201ENST00000240361 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
SNX18Q96RF0 APBB2-224ENST00000513140 4166 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
SNX18Q96RF0 LINC00920-201ENST00000499966 2147 ntTSL 2 BASIC7.33□□□□□ -1.24
SNX18Q96RF0 AC061975.7-201ENST00000592016 2692 ntBASIC7.33□□□□□ -1.24
SNX18Q96RF0 RAB13-205ENST00000614713 1353 ntTSL 5 BASIC7.33□□□□□ -1.24
SNX18Q96RF0 GPM6A-202ENST00000393658 2821 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SNX18Q96RF0 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC7.32□□□□□ -1.24
SNX18Q96RF0 GLYAT-202ENST00000344743 1735 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SNX18Q96RF0 OR4P4-202ENST00000641760 2086 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
SNX18Q96RF0 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SNX18Q96RF0 IL5RA-202ENST00000311981 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
SNX18Q96RF0 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC7.32□□□□□ -1.24
SNX18Q96RF0 AC036108.4-201ENST00000611654 2516 ntBASIC7.32□□□□□ -1.24
SNX18Q96RF0 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
SNX18Q96RF0 AL591379.1-201ENST00000315293 3739 ntTSL 2 BASIC7.32□□□□□ -1.24
SNX18Q96RF0 AC116535.1-201ENST00000499765 2335 ntTSL 2 BASIC7.32□□□□□ -1.24
SNX18Q96RF0 MITD1-201ENST00000289359 939 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SNX18Q96RF0 DEFB104A-201ENST00000314265 281 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SNX18Q96RF0 DEFB104B-201ENST00000316169 281 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SNX18Q96RF0 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SNX18Q96RF0 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SNX18Q96RF0 FARP1-202ENST00000376581 1021 ntTSL 2 BASIC7.32□□□□□ -1.24
SNX18Q96RF0 BMP2KL-201ENST00000414251 1225 ntBASIC7.32□□□□□ -1.24
SNX18Q96RF0 AC024082.1-201ENST00000435250 699 ntBASIC7.32□□□□□ -1.24
SNX18Q96RF0 LINC01422-202ENST00000438113 517 ntTSL 5 BASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms