Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 ANAPC5-208ENST00000535482 2077 ntTSL 2 BASIC8.41□□□□□ -1.06
CDK5RAP1Q96SZ6 CHD7-203ENST00000525508 4777 ntTSL 5 BASIC8.41□□□□□ -1.06
CDK5RAP1Q96SZ6 PKHD1-201ENST00000340994 11589 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
CDK5RAP1Q96SZ6 MYO10-201ENST00000274203 11456 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
CDK5RAP1Q96SZ6 GPM6B-201ENST00000316715 3275 ntAPPRIS ALT1 TSL 2 BASIC8.41□□□□□ -1.06
CDK5RAP1Q96SZ6 SLC26A9-201ENST00000340781 4510 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
CDK5RAP1Q96SZ6 IKZF3-203ENST00000346872 9667 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CDK5RAP1Q96SZ6 ZNF207-202ENST00000342555 1905 ntTSL 5 BASIC8.41□□□□□ -1.06
CDK5RAP1Q96SZ6 MFSD8-207ENST00000513559 1813 ntTSL 2 BASIC8.4□□□□□ -1.06
CDK5RAP1Q96SZ6 PCM1-212ENST00000519253 6443 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
CDK5RAP1Q96SZ6 AF127936.2-201ENST00000455253 1724 ntTSL 5 BASIC8.4□□□□□ -1.06
CDK5RAP1Q96SZ6 LINC02071-201ENST00000514726 1723 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
CDK5RAP1Q96SZ6 IL1R1-208ENST00000424272 2658 ntTSL 5 BASIC8.4□□□□□ -1.06
CDK5RAP1Q96SZ6 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
CDK5RAP1Q96SZ6 RBMY1A1-201ENST00000303902 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
CDK5RAP1Q96SZ6 RBMY1B-203ENST00000619219 1491 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
CDK5RAP1Q96SZ6 GP2-201ENST00000302555 3406 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
CDK5RAP1Q96SZ6 FRMPD2-213ENST00000636244 4194 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
CDK5RAP1Q96SZ6 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
CDK5RAP1Q96SZ6 ZC3H14-203ENST00000318308 1384 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
CDK5RAP1Q96SZ6 ZNF317-201ENST00000247956 4073 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
CDK5RAP1Q96SZ6 NCEH1-206ENST00000543711 4062 ntTSL 2 BASIC8.4□□□□□ -1.06
CDK5RAP1Q96SZ6 GCNT2-216ENST00000495262 2214 ntAPPRIS ALT1 TSL 2 BASIC8.4□□□□□ -1.06
CDK5RAP1Q96SZ6 RN7SKP199-201ENST00000410325 305 ntBASIC8.4□□□□□ -1.06
CDK5RAP1Q96SZ6 LINC02470-201ENST00000412084 979 ntTSL 2 BASIC8.4□□□□□ -1.06
CDK5RAP1Q96SZ6 GYG1P2-201ENST00000426437 1006 ntBASIC8.4□□□□□ -1.06
CDK5RAP1Q96SZ6 ATP13A4-AS1-201ENST00000426459 795 ntTSL 3 BASIC8.4□□□□□ -1.06
CDK5RAP1Q96SZ6 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC8.4□□□□□ -1.06
CDK5RAP1Q96SZ6 RPS13P2-201ENST00000437890 455 ntBASIC8.4□□□□□ -1.06
CDK5RAP1Q96SZ6 AC097358.1-201ENST00000438827 582 ntBASIC8.4□□□□□ -1.06
CDK5RAP1Q96SZ6 LINC01284-201ENST00000442994 730 ntTSL 5 BASIC8.4□□□□□ -1.06
CDK5RAP1Q96SZ6 GGT3P-203ENST00000445651 368 ntTSL 2 BASIC8.4□□□□□ -1.06
CDK5RAP1Q96SZ6 AL136452.1-201ENST00000448495 439 ntBASIC8.4□□□□□ -1.06
CDK5RAP1Q96SZ6 PROX1-AS1-203ENST00000451396 476 ntTSL 5 BASIC8.4□□□□□ -1.06
CDK5RAP1Q96SZ6 AL133232.1-201ENST00000458293 483 ntTSL 5 BASIC8.4□□□□□ -1.06
CDK5RAP1Q96SZ6 AC090680.1-201ENST00000464696 860 ntBASIC8.4□□□□□ -1.06
CDK5RAP1Q96SZ6 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC8.4□□□□□ -1.06
CDK5RAP1Q96SZ6 AC116353.1-201ENST00000489727 316 ntBASIC8.4□□□□□ -1.06
CDK5RAP1Q96SZ6 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
CDK5RAP1Q96SZ6 AC111198.1-201ENST00000505575 606 ntTSL 4 BASIC8.4□□□□□ -1.06
CDK5RAP1Q96SZ6 AC107385.1-201ENST00000507985 778 ntBASIC8.4□□□□□ -1.06
CDK5RAP1Q96SZ6 ANKRD55-205ENST00000513241 626 ntTSL 5 BASIC8.4□□□□□ -1.06
CDK5RAP1Q96SZ6 LINC02200-203ENST00000513687 541 ntTSL 3 BASIC8.4□□□□□ -1.06
CDK5RAP1Q96SZ6 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC8.4□□□□□ -1.06
CDK5RAP1Q96SZ6 NTAN1P2-201ENST00000515730 940 ntBASIC8.4□□□□□ -1.06
CDK5RAP1Q96SZ6 IGHVIII-82-201ENST00000522058 250 ntBASIC8.4□□□□□ -1.06
CDK5RAP1Q96SZ6 MRPL40P1-201ENST00000542687 604 ntBASIC8.4□□□□□ -1.06
CDK5RAP1Q96SZ6 MUCL1-202ENST00000546809 439 ntAPPRIS ALT2 TSL 3 BASIC8.4□□□□□ -1.06
CDK5RAP1Q96SZ6 DNM1P34-202ENST00000567850 315 ntBASIC8.4□□□□□ -1.06
CDK5RAP1Q96SZ6 AC087499.3-201ENST00000578210 717 ntTSL 2 BASIC8.4□□□□□ -1.06
CDK5RAP1Q96SZ6 MIR3689F-201ENST00000579617 66 ntBASIC8.4□□□□□ -1.06
CDK5RAP1Q96SZ6 AC024933.1-201ENST00000608472 348 ntBASIC8.4□□□□□ -1.06
CDK5RAP1Q96SZ6 STARD13-AS-224ENST00000608496 787 ntTSL 5 BASIC8.4□□□□□ -1.06
CDK5RAP1Q96SZ6 AC026367.2-201ENST00000610630 553 ntBASIC8.4□□□□□ -1.06
CDK5RAP1Q96SZ6 uc_338.33-201ENST00000614988 170 ntBASIC8.4□□□□□ -1.06
CDK5RAP1Q96SZ6 CTXN3-204ENST00000620385 1208 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
CDK5RAP1Q96SZ6 AP000720.1-201ENST00000625091 483 ntBASIC8.4□□□□□ -1.06
CDK5RAP1Q96SZ6 SLC8A1-AS1-228ENST00000627210 225 ntTSL 5 BASIC8.4□□□□□ -1.06
CDK5RAP1Q96SZ6 AC026950.2-201ENST00000633456 470 ntTSL 3 BASIC8.4□□□□□ -1.06
CDK5RAP1Q96SZ6 LINC01359-205ENST00000634604 1050 ntTSL 5 BASIC8.4□□□□□ -1.06
CDK5RAP1Q96SZ6 ABCB1-210ENST00000543898 4524 ntTSL 5 BASIC8.4□□□□□ -1.07
CDK5RAP1Q96SZ6 AL133279.3-201ENST00000563140 2352 ntBASIC8.4□□□□□ -1.07
CDK5RAP1Q96SZ6 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC8.4□□□□□ -1.07
CDK5RAP1Q96SZ6 CCRL2-204ENST00000400882 1642 ntAPPRIS P1 BASIC8.4□□□□□ -1.07
CDK5RAP1Q96SZ6 AC011369.1-201ENST00000517408 2181 ntTSL 3 BASIC8.39□□□□□ -1.07
CDK5RAP1Q96SZ6 ZKSCAN8-202ENST00000457389 2071 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CDK5RAP1Q96SZ6 HSD11B1-203ENST00000367028 1461 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
CDK5RAP1Q96SZ6 SMN2-214ENST00000626847 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
CDK5RAP1Q96SZ6 AC107058.1-201ENST00000513297 1384 ntBASIC8.39□□□□□ -1.07
CDK5RAP1Q96SZ6 LY75-CD302-201ENST00000504764 5650 ntAPPRIS P4 TSL 2 BASIC8.39□□□□□ -1.07
CDK5RAP1Q96SZ6 SLC2A3-201ENST00000075120 3915 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CDK5RAP1Q96SZ6 AL121936.1-201ENST00000641660 2884 ntBASIC8.39□□□□□ -1.07
CDK5RAP1Q96SZ6 PLEKHA5-215ENST00000539256 3357 ntTSL 2 BASIC8.39□□□□□ -1.07
CDK5RAP1Q96SZ6 RN7SKP76-201ENST00000364419 323 ntBASIC8.39□□□□□ -1.07
CDK5RAP1Q96SZ6 PCOTH-201ENST00000382133 805 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CDK5RAP1Q96SZ6 RAET1K-201ENST00000403651 784 ntBASIC8.39□□□□□ -1.07
CDK5RAP1Q96SZ6 RPS7-204ENST00000407445 833 ntTSL 2 BASIC8.39□□□□□ -1.07
CDK5RAP1Q96SZ6 IGLC6-201ENST00000410078 317 ntBASIC8.39□□□□□ -1.07
CDK5RAP1Q96SZ6 ENTPD3-AS1-201ENST00000420850 791 ntTSL 2 BASIC8.39□□□□□ -1.07
CDK5RAP1Q96SZ6 AC006455.6-201ENST00000426192 893 ntBASIC8.39□□□□□ -1.07
CDK5RAP1Q96SZ6 Z98752.2-201ENST00000432727 312 ntBASIC8.39□□□□□ -1.07
CDK5RAP1Q96SZ6 LINC01015-204ENST00000445296 399 ntTSL 3 BASIC8.39□□□□□ -1.07
CDK5RAP1Q96SZ6 AC245047.6-201ENST00000445444 617 ntBASIC8.39□□□□□ -1.07
CDK5RAP1Q96SZ6 ELOBP1-201ENST00000447693 357 ntBASIC8.39□□□□□ -1.07
CDK5RAP1Q96SZ6 AC007731.3-201ENST00000458154 446 ntTSL 5 BASIC8.39□□□□□ -1.07
CDK5RAP1Q96SZ6 BX890604.1-206ENST00000471090 922 ntTSL 3 BASIC8.39□□□□□ -1.07
CDK5RAP1Q96SZ6 AL122013.1-201ENST00000473054 801 ntBASIC8.39□□□□□ -1.07
CDK5RAP1Q96SZ6 PA2G4P4-201ENST00000473864 1182 ntBASIC8.39□□□□□ -1.07
CDK5RAP1Q96SZ6 RN7SL201P-201ENST00000482306 296 ntBASIC8.39□□□□□ -1.07
CDK5RAP1Q96SZ6 LEMD1-208ENST00000495594 637 ntTSL 3 BASIC8.39□□□□□ -1.07
CDK5RAP1Q96SZ6 RN7SL519P-201ENST00000497925 288 ntBASIC8.39□□□□□ -1.07
CDK5RAP1Q96SZ6 HSPE1P10-201ENST00000508631 558 ntBASIC8.39□□□□□ -1.07
CDK5RAP1Q96SZ6 AL645924.2-201ENST00000508865 900 ntBASIC8.39□□□□□ -1.07
CDK5RAP1Q96SZ6 AF186996.3-201ENST00000509527 964 ntBASIC8.39□□□□□ -1.07
CDK5RAP1Q96SZ6 OR4A9P-201ENST00000526326 944 ntBASIC8.39□□□□□ -1.07
CDK5RAP1Q96SZ6 STH-201ENST00000537309 445 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
CDK5RAP1Q96SZ6 AC007570.1-201ENST00000539987 603 ntTSL 3 BASIC8.39□□□□□ -1.07
CDK5RAP1Q96SZ6 PRR13-207ENST00000549581 838 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
CDK5RAP1Q96SZ6 AC063923.2-201ENST00000562158 928 ntBASIC8.39□□□□□ -1.07
CDK5RAP1Q96SZ6 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC8.39□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms