Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.56■□□□□ 0.4
LINC01560Q8TB33 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC01560Q8TB33 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
LINC01560Q8TB33 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LINC01560Q8TB33 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.56■□□□□ 0.4
LINC01560Q8TB33 FAM210CP-201ENST00000445714 574 ntBASIC17.56■□□□□ 0.4
LINC01560Q8TB33 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.56■□□□□ 0.4
LINC01560Q8TB33 RARRES2P10-201ENST00000564312 460 ntBASIC17.56■□□□□ 0.4
LINC01560Q8TB33 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.56■□□□□ 0.4
LINC01560Q8TB33 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.56■□□□□ 0.4
LINC01560Q8TB33 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC01560Q8TB33 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
LINC01560Q8TB33 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.56■□□□□ 0.4
LINC01560Q8TB33 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC01560Q8TB33 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC01560Q8TB33 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC01560Q8TB33 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC01560Q8TB33 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC01560Q8TB33 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LINC01560Q8TB33 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC01560Q8TB33 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LINC01560Q8TB33 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC01560Q8TB33 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.55■□□□□ 0.4
LINC01560Q8TB33 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LINC01560Q8TB33 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LINC01560Q8TB33 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINC01560Q8TB33 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LINC01560Q8TB33 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
LINC01560Q8TB33 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
LINC01560Q8TB33 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
LINC01560Q8TB33 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
LINC01560Q8TB33 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LINC01560Q8TB33 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.55■□□□□ 0.4
LINC01560Q8TB33 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LINC01560Q8TB33 KRT18P21-201ENST00000515767 1272 ntBASIC17.55■□□□□ 0.4
LINC01560Q8TB33 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.55■□□□□ 0.4
LINC01560Q8TB33 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LINC01560Q8TB33 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.55■□□□□ 0.4
LINC01560Q8TB33 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LINC01560Q8TB33 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.55■□□□□ 0.4
LINC01560Q8TB33 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINC01560Q8TB33 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.55■□□□□ 0.4
LINC01560Q8TB33 AC133561.5-201ENST00000635547 218 ntBASIC17.55■□□□□ 0.4
LINC01560Q8TB33 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINC01560Q8TB33 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
LINC01560Q8TB33 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINC01560Q8TB33 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINC01560Q8TB33 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.55■□□□□ 0.4
LINC01560Q8TB33 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINC01560Q8TB33 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
LINC01560Q8TB33 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.55■□□□□ 0.4
LINC01560Q8TB33 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINC01560Q8TB33 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINC01560Q8TB33 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINC01560Q8TB33 Z98882.1-201ENST00000622160 2253 ntBASIC17.54■□□□□ 0.4
LINC01560Q8TB33 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINC01560Q8TB33 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LINC01560Q8TB33 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINC01560Q8TB33 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINC01560Q8TB33 MIR1224-201ENST00000408193 85 ntBASIC17.54■□□□□ 0.4
LINC01560Q8TB33 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.54■□□□□ 0.4
LINC01560Q8TB33 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LINC01560Q8TB33 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.54■□□□□ 0.4
LINC01560Q8TB33 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.54■□□□□ 0.4
LINC01560Q8TB33 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.54■□□□□ 0.4
LINC01560Q8TB33 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.54■□□□□ 0.4
LINC01560Q8TB33 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINC01560Q8TB33 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.54■□□□□ 0.4
LINC01560Q8TB33 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINC01560Q8TB33 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.54■□□□□ 0.4
LINC01560Q8TB33 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINC01560Q8TB33 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINC01560Q8TB33 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINC01560Q8TB33 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC17.53■□□□□ 0.4
LINC01560Q8TB33 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
LINC01560Q8TB33 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LINC01560Q8TB33 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LINC01560Q8TB33 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LINC01560Q8TB33 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
LINC01560Q8TB33 AL355075.4-201ENST00000554988 638 ntBASIC17.53■□□□□ 0.4
LINC01560Q8TB33 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.53■□□□□ 0.4
LINC01560Q8TB33 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.53■□□□□ 0.4
LINC01560Q8TB33 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
LINC01560Q8TB33 MIR2861-201ENST00000636310 90 ntBASIC17.53■□□□□ 0.4
LINC01560Q8TB33 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.53■□□□□ 0.4
LINC01560Q8TB33 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LINC01560Q8TB33 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.53■□□□□ 0.4
LINC01560Q8TB33 KRT8P36-201ENST00000489121 1440 ntBASIC17.53■□□□□ 0.4
LINC01560Q8TB33 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.53■□□□□ 0.4
LINC01560Q8TB33 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LINC01560Q8TB33 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LINC01560Q8TB33 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LINC01560Q8TB33 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
LINC01560Q8TB33 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LINC01560Q8TB33 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LINC01560Q8TB33 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
LINC01560Q8TB33 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.52■□□□□ 0.4
LINC01560Q8TB33 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LINC01560Q8TB33 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.52■□□□□ 0.4
LINC01560Q8TB33 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 10 ms