Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim6Q8BGE7 Nespas-201ENSMUST00000143738 1083 ntBASIC18.63■□□□□ 0.57
Trim6Q8BGE7 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Trim6Q8BGE7 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.63■□□□□ 0.57
Trim6Q8BGE7 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim6Q8BGE7 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim6Q8BGE7 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim6Q8BGE7 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim6Q8BGE7 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim6Q8BGE7 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim6Q8BGE7 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim6Q8BGE7 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trim6Q8BGE7 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Trim6Q8BGE7 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trim6Q8BGE7 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim6Q8BGE7 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim6Q8BGE7 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim6Q8BGE7 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
Trim6Q8BGE7 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Trim6Q8BGE7 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim6Q8BGE7 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Trim6Q8BGE7 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim6Q8BGE7 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Trim6Q8BGE7 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trim6Q8BGE7 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim6Q8BGE7 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trim6Q8BGE7 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim6Q8BGE7 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim6Q8BGE7 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim6Q8BGE7 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim6Q8BGE7 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Trim6Q8BGE7 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim6Q8BGE7 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim6Q8BGE7 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Trim6Q8BGE7 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim6Q8BGE7 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trim6Q8BGE7 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.61■□□□□ 0.57
Trim6Q8BGE7 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim6Q8BGE7 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim6Q8BGE7 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trim6Q8BGE7 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.61■□□□□ 0.57
Trim6Q8BGE7 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.61■□□□□ 0.57
Trim6Q8BGE7 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Trim6Q8BGE7 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Trim6Q8BGE7 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trim6Q8BGE7 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim6Q8BGE7 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trim6Q8BGE7 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
Trim6Q8BGE7 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.6■□□□□ 0.57
Trim6Q8BGE7 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trim6Q8BGE7 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim6Q8BGE7 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim6Q8BGE7 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim6Q8BGE7 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim6Q8BGE7 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.6■□□□□ 0.57
Trim6Q8BGE7 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim6Q8BGE7 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim6Q8BGE7 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim6Q8BGE7 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim6Q8BGE7 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim6Q8BGE7 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Trim6Q8BGE7 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim6Q8BGE7 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.59■□□□□ 0.57
Trim6Q8BGE7 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim6Q8BGE7 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim6Q8BGE7 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trim6Q8BGE7 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim6Q8BGE7 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim6Q8BGE7 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.59■□□□□ 0.57
Trim6Q8BGE7 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Trim6Q8BGE7 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.59■□□□□ 0.57
Trim6Q8BGE7 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.59■□□□□ 0.57
Trim6Q8BGE7 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
Trim6Q8BGE7 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.59■□□□□ 0.57
Trim6Q8BGE7 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trim6Q8BGE7 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Trim6Q8BGE7 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim6Q8BGE7 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.59■□□□□ 0.57
Trim6Q8BGE7 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
Trim6Q8BGE7 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim6Q8BGE7 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim6Q8BGE7 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Trim6Q8BGE7 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trim6Q8BGE7 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trim6Q8BGE7 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Trim6Q8BGE7 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Trim6Q8BGE7 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.58■□□□□ 0.56
Trim6Q8BGE7 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Trim6Q8BGE7 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Trim6Q8BGE7 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.58■□□□□ 0.56
Trim6Q8BGE7 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.58■□□□□ 0.56
Trim6Q8BGE7 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.58■□□□□ 0.56
Trim6Q8BGE7 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.58■□□□□ 0.56
Trim6Q8BGE7 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim6Q8BGE7 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.58■□□□□ 0.56
Trim6Q8BGE7 Gm10493-201ENSMUST00000097270 612 ntBASIC18.58■□□□□ 0.56
Trim6Q8BGE7 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim6Q8BGE7 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim6Q8BGE7 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Trim6Q8BGE7 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms