Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
RORAP35398 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RORAP35398 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.22■□□□□ 0.67
RORAP35398 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RORAP35398 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
RORAP35398 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RORAP35398 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
RORAP35398 POM121L13P-201ENST00000422362 380 ntBASIC19.21■□□□□ 0.67
RORAP35398 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.21■□□□□ 0.67
RORAP35398 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RORAP35398 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RORAP35398 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.21■□□□□ 0.67
RORAP35398 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.21■□□□□ 0.67
RORAP35398 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
RORAP35398 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.21■□□□□ 0.67
RORAP35398 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.21■□□□□ 0.67
RORAP35398 AC027702.1-201ENST00000563810 1770 ntBASIC19.21■□□□□ 0.67
RORAP35398 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
RORAP35398 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RORAP35398 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RORAP35398 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RORAP35398 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.21■□□□□ 0.67
RORAP35398 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.21■□□□□ 0.66
RORAP35398 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RORAP35398 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RORAP35398 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.2■□□□□ 0.66
RORAP35398 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.2■□□□□ 0.66
RORAP35398 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
RORAP35398 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RORAP35398 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RORAP35398 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.2■□□□□ 0.66
RORAP35398 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.2■□□□□ 0.66
RORAP35398 AC005829.2-201ENST00000571422 1056 ntBASIC19.2■□□□□ 0.66
RORAP35398 RN7SL471P-201ENST00000580476 299 ntBASIC19.2■□□□□ 0.66
RORAP35398 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RORAP35398 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RORAP35398 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.2■□□□□ 0.66
RORAP35398 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RORAP35398 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.19■□□□□ 0.66
RORAP35398 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.19■□□□□ 0.66
RORAP35398 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.19■□□□□ 0.66
RORAP35398 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RORAP35398 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RORAP35398 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RORAP35398 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.19■□□□□ 0.66
RORAP35398 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RORAP35398 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.19■□□□□ 0.66
RORAP35398 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.19■□□□□ 0.66
RORAP35398 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
RORAP35398 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.19■□□□□ 0.66
RORAP35398 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.19■□□□□ 0.66
RORAP35398 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RORAP35398 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.19■□□□□ 0.66
RORAP35398 AC005229.4-201ENST00000610085 2198 ntBASIC19.19■□□□□ 0.66
RORAP35398 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RORAP35398 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
RORAP35398 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RORAP35398 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RORAP35398 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.18■□□□□ 0.66
RORAP35398 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RORAP35398 AC121338.2-201ENST00000622535 1744 ntBASIC19.18■□□□□ 0.66
RORAP35398 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RORAP35398 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RORAP35398 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RORAP35398 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RORAP35398 RPPH1-201ENST00000516869 333 ntBASIC19.18■□□□□ 0.66
RORAP35398 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RORAP35398 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.18■□□□□ 0.66
RORAP35398 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.18■□□□□ 0.66
RORAP35398 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RORAP35398 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RORAP35398 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.18■□□□□ 0.66
RORAP35398 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RORAP35398 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RORAP35398 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RORAP35398 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RORAP35398 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RORAP35398 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.18■□□□□ 0.66
RORAP35398 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.18■□□□□ 0.66
RORAP35398 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RORAP35398 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
RORAP35398 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RORAP35398 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RORAP35398 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RORAP35398 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
RORAP35398 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RORAP35398 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RORAP35398 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RORAP35398 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RORAP35398 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RORAP35398 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RORAP35398 UBE2SP1-201ENST00000450587 669 ntBASIC19.17■□□□□ 0.66
RORAP35398 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.17■□□□□ 0.66
RORAP35398 C1QBPP2-201ENST00000528754 825 ntBASIC19.17■□□□□ 0.66
RORAP35398 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.17■□□□□ 0.66
RORAP35398 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.17■□□□□ 0.66
RORAP35398 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RORAP35398 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RORAP35398 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
RORAP35398 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms