Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
CSB-PGBD3P0DP91 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
CSB-PGBD3P0DP91 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CSB-PGBD3P0DP91 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
CSB-PGBD3P0DP91 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
CSB-PGBD3P0DP91 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
CSB-PGBD3P0DP91 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CSB-PGBD3P0DP91 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC26.93■■□□□ 1.9
CSB-PGBD3P0DP91 AL049597.2-201ENST00000565575 961 ntBASIC26.93■■□□□ 1.9
CSB-PGBD3P0DP91 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CSB-PGBD3P0DP91 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC26.93■■□□□ 1.9
CSB-PGBD3P0DP91 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CSB-PGBD3P0DP91 DYM-203ENST00000442713 2147 ntTSL 2 BASIC26.93■■□□□ 1.9
CSB-PGBD3P0DP91 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC26.93■■□□□ 1.9
CSB-PGBD3P0DP91 AC011484.1-201ENST00000377652 1995 ntBASIC26.92■■□□□ 1.9
CSB-PGBD3P0DP91 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
CSB-PGBD3P0DP91 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CSB-PGBD3P0DP91 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC26.92■■□□□ 1.9
CSB-PGBD3P0DP91 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
CSB-PGBD3P0DP91 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC26.92■■□□□ 1.9
CSB-PGBD3P0DP91 RBM17P1-201ENST00000453646 1190 ntBASIC26.92■■□□□ 1.9
CSB-PGBD3P0DP91 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC26.92■■□□□ 1.9
CSB-PGBD3P0DP91 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC26.92■■□□□ 1.9
CSB-PGBD3P0DP91 AC005363.2-201ENST00000618631 242 ntBASIC26.92■■□□□ 1.9
CSB-PGBD3P0DP91 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CSB-PGBD3P0DP91 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC26.92■■□□□ 1.9
CSB-PGBD3P0DP91 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CSB-PGBD3P0DP91 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC26.92■■□□□ 1.9
CSB-PGBD3P0DP91 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
CSB-PGBD3P0DP91 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC26.91■■□□□ 1.9
CSB-PGBD3P0DP91 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CSB-PGBD3P0DP91 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC26.91■■□□□ 1.9
CSB-PGBD3P0DP91 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC26.91■■□□□ 1.9
CSB-PGBD3P0DP91 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC26.91■■□□□ 1.9
CSB-PGBD3P0DP91 AP000525.1-201ENST00000608286 694 ntBASIC26.91■■□□□ 1.9
CSB-PGBD3P0DP91 AL121906.2-201ENST00000621597 723 ntBASIC26.91■■□□□ 1.9
CSB-PGBD3P0DP91 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CSB-PGBD3P0DP91 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CSB-PGBD3P0DP91 KRT8P9-201ENST00000558927 1449 ntBASIC26.9■■□□□ 1.9
CSB-PGBD3P0DP91 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC26.9■■□□□ 1.9
CSB-PGBD3P0DP91 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CSB-PGBD3P0DP91 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CSB-PGBD3P0DP91 AP002982.1-201ENST00000492365 877 ntBASIC26.9■■□□□ 1.9
CSB-PGBD3P0DP91 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC26.9■■□□□ 1.9
CSB-PGBD3P0DP91 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC26.9■■□□□ 1.9
CSB-PGBD3P0DP91 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CSB-PGBD3P0DP91 AC145285.6-201ENST00000604632 637 ntBASIC26.9■■□□□ 1.9
CSB-PGBD3P0DP91 AC004264.1-201ENST00000608354 794 ntBASIC26.9■■□□□ 1.9
CSB-PGBD3P0DP91 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC26.9■■□□□ 1.9
CSB-PGBD3P0DP91 AC092865.7-201ENST00000641832 219 ntBASIC26.9■■□□□ 1.9
CSB-PGBD3P0DP91 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC26.89■■□□□ 1.9
CSB-PGBD3P0DP91 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC26.89■■□□□ 1.9
CSB-PGBD3P0DP91 AC079598.2-202ENST00000546624 1451 ntBASIC26.89■■□□□ 1.9
CSB-PGBD3P0DP91 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC26.89■■□□□ 1.9
CSB-PGBD3P0DP91 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC26.89■■□□□ 1.9
CSB-PGBD3P0DP91 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC26.89■■□□□ 1.9
CSB-PGBD3P0DP91 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
CSB-PGBD3P0DP91 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
CSB-PGBD3P0DP91 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
CSB-PGBD3P0DP91 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
CSB-PGBD3P0DP91 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC26.89■■□□□ 1.89
CSB-PGBD3P0DP91 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CSB-PGBD3P0DP91 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC26.88■■□□□ 1.89
CSB-PGBD3P0DP91 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC26.88■■□□□ 1.89
CSB-PGBD3P0DP91 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC26.88■■□□□ 1.89
CSB-PGBD3P0DP91 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
CSB-PGBD3P0DP91 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC26.88■■□□□ 1.89
CSB-PGBD3P0DP91 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC26.88■■□□□ 1.89
CSB-PGBD3P0DP91 NUDT16P1-203ENST00000513809 620 ntBASIC26.88■■□□□ 1.89
CSB-PGBD3P0DP91 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC26.88■■□□□ 1.89
CSB-PGBD3P0DP91 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC26.88■■□□□ 1.89
CSB-PGBD3P0DP91 REXO1L10P-201ENST00000615707 1290 ntBASIC26.88■■□□□ 1.89
CSB-PGBD3P0DP91 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC26.88■■□□□ 1.89
CSB-PGBD3P0DP91 AL590326.2-201ENST00000625139 305 ntBASIC26.88■■□□□ 1.89
CSB-PGBD3P0DP91 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
CSB-PGBD3P0DP91 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC26.88■■□□□ 1.89
CSB-PGBD3P0DP91 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CSB-PGBD3P0DP91 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CSB-PGBD3P0DP91 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CSB-PGBD3P0DP91 STAC-204ENST00000457375 1366 ntTSL 2 BASIC26.87■■□□□ 1.89
CSB-PGBD3P0DP91 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC26.87■■□□□ 1.89
CSB-PGBD3P0DP91 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CSB-PGBD3P0DP91 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
CSB-PGBD3P0DP91 UNC93B2-201ENST00000285383 730 ntBASIC26.87■■□□□ 1.89
CSB-PGBD3P0DP91 MIR1238-201ENST00000408483 83 ntBASIC26.87■■□□□ 1.89
CSB-PGBD3P0DP91 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC26.87■■□□□ 1.89
CSB-PGBD3P0DP91 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC26.87■■□□□ 1.89
CSB-PGBD3P0DP91 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
CSB-PGBD3P0DP91 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC26.87■■□□□ 1.89
CSB-PGBD3P0DP91 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC26.87■■□□□ 1.89
CSB-PGBD3P0DP91 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CSB-PGBD3P0DP91 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CSB-PGBD3P0DP91 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CSB-PGBD3P0DP91 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CSB-PGBD3P0DP91 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC26.87■■□□□ 1.89
CSB-PGBD3P0DP91 GUSBP5-202ENST00000510805 1989 ntBASIC26.86■■□□□ 1.89
CSB-PGBD3P0DP91 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CSB-PGBD3P0DP91 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
CSB-PGBD3P0DP91 AC005521.1-201ENST00000393351 872 ntBASIC26.86■■□□□ 1.89
CSB-PGBD3P0DP91 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms