Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
PGK1P00558 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC22.63■■□□□ 1.21
PGK1P00558 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC22.63■■□□□ 1.21
PGK1P00558 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC22.63■■□□□ 1.21
PGK1P00558 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC22.63■■□□□ 1.21
PGK1P00558 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC22.63■■□□□ 1.21
PGK1P00558 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PGK1P00558 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
PGK1P00558 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC22.62■■□□□ 1.21
PGK1P00558 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
PGK1P00558 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC22.62■■□□□ 1.21
PGK1P00558 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PGK1P00558 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC22.62■■□□□ 1.21
PGK1P00558 FDX2-207ENST00000494368 584 ntTSL 4 BASIC22.62■■□□□ 1.21
PGK1P00558 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC22.62■■□□□ 1.21
PGK1P00558 MIR6786-201ENST00000616843 113 ntBASIC22.62■■□□□ 1.21
PGK1P00558 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC22.62■■□□□ 1.21
PGK1P00558 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PGK1P00558 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PGK1P00558 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PGK1P00558 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PGK1P00558 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PGK1P00558 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
PGK1P00558 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PGK1P00558 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PGK1P00558 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PGK1P00558 SRI-203ENST00000419179 1307 ntTSL 2 BASIC22.61■■□□□ 1.21
PGK1P00558 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PGK1P00558 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PGK1P00558 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
PGK1P00558 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC22.61■■□□□ 1.21
PGK1P00558 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PGK1P00558 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
PGK1P00558 AL353807.1-201ENST00000427475 662 ntBASIC22.61■■□□□ 1.21
PGK1P00558 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PGK1P00558 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PGK1P00558 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PGK1P00558 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
PGK1P00558 KRT8P9-201ENST00000558927 1449 ntBASIC22.61■■□□□ 1.21
PGK1P00558 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC22.61■■□□□ 1.21
PGK1P00558 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC22.61■■□□□ 1.21
PGK1P00558 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PGK1P00558 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PGK1P00558 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PGK1P00558 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PGK1P00558 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PGK1P00558 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PGK1P00558 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC22.6■■□□□ 1.21
PGK1P00558 AC011484.1-201ENST00000377652 1995 ntBASIC22.6■■□□□ 1.21
PGK1P00558 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC22.6■■□□□ 1.21
PGK1P00558 ARMC10P1-201ENST00000313754 855 ntBASIC22.6■■□□□ 1.21
PGK1P00558 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
PGK1P00558 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
PGK1P00558 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PGK1P00558 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PGK1P00558 AC023632.3-201ENST00000521633 145 ntBASIC22.6■■□□□ 1.21
PGK1P00558 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC22.6■■□□□ 1.21
PGK1P00558 AC073195.1-201ENST00000607241 877 ntBASIC22.6■■□□□ 1.21
PGK1P00558 DECR2-212ENST00000627716 352 ntTSL 2 BASIC22.6■■□□□ 1.21
PGK1P00558 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PGK1P00558 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
PGK1P00558 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC22.6■■□□□ 1.21
PGK1P00558 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PGK1P00558 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PGK1P00558 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PGK1P00558 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PGK1P00558 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
PGK1P00558 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC22.59■■□□□ 1.21
PGK1P00558 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
PGK1P00558 RBM17P1-201ENST00000453646 1190 ntBASIC22.59■■□□□ 1.21
PGK1P00558 PNN-205ENST00000556530 601 ntTSL 2 BASIC22.59■■□□□ 1.21
PGK1P00558 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC22.59■■□□□ 1.21
PGK1P00558 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PGK1P00558 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PGK1P00558 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PGK1P00558 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC22.58■■□□□ 1.21
PGK1P00558 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PGK1P00558 GUSBP5-202ENST00000510805 1989 ntBASIC22.58■■□□□ 1.21
PGK1P00558 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PGK1P00558 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
PGK1P00558 NT5C-211ENST00000582170 653 ntTSL 3 BASIC22.58■■□□□ 1.21
PGK1P00558 AC079598.2-202ENST00000546624 1451 ntBASIC22.58■■□□□ 1.2
PGK1P00558 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
PGK1P00558 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.2
PGK1P00558 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
PGK1P00558 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC22.57■■□□□ 1.2
PGK1P00558 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PGK1P00558 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PGK1P00558 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC22.57■■□□□ 1.2
PGK1P00558 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PGK1P00558 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC22.57■■□□□ 1.2
PGK1P00558 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC22.57■■□□□ 1.2
PGK1P00558 AL049597.2-201ENST00000565575 961 ntBASIC22.57■■□□□ 1.2
PGK1P00558 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PGK1P00558 AC145285.6-201ENST00000604632 637 ntBASIC22.57■■□□□ 1.2
PGK1P00558 AP000525.1-201ENST00000608286 694 ntBASIC22.57■■□□□ 1.2
PGK1P00558 AC092865.7-201ENST00000641832 219 ntBASIC22.57■■□□□ 1.2
PGK1P00558 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PGK1P00558 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC22.57■■□□□ 1.2
PGK1P00558 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms