Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
CACNA1FO60840 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
CACNA1FO60840 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC25.61■■□□□ 1.69
CACNA1FO60840 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC25.6■■□□□ 1.69
CACNA1FO60840 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
CACNA1FO60840 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC25.6■■□□□ 1.69
CACNA1FO60840 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC25.6■■□□□ 1.69
CACNA1FO60840 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC25.6■■□□□ 1.69
CACNA1FO60840 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC25.6■■□□□ 1.69
CACNA1FO60840 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC25.6■■□□□ 1.69
CACNA1FO60840 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC25.6■■□□□ 1.69
CACNA1FO60840 DPP3P2-201ENST00000416030 1696 ntBASIC25.6■■□□□ 1.69
CACNA1FO60840 KRT8P20-201ENST00000423953 1409 ntBASIC25.6■■□□□ 1.69
CACNA1FO60840 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
CACNA1FO60840 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CACNA1FO60840 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
CACNA1FO60840 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CACNA1FO60840 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CACNA1FO60840 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CACNA1FO60840 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CACNA1FO60840 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC25.6■■□□□ 1.69
CACNA1FO60840 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CACNA1FO60840 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CACNA1FO60840 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CACNA1FO60840 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CACNA1FO60840 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CACNA1FO60840 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CACNA1FO60840 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC25.59■■□□□ 1.69
CACNA1FO60840 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CACNA1FO60840 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC25.59■■□□□ 1.69
CACNA1FO60840 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC25.59■■□□□ 1.69
CACNA1FO60840 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
CACNA1FO60840 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
CACNA1FO60840 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CACNA1FO60840 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CACNA1FO60840 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CACNA1FO60840 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CACNA1FO60840 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC25.58■■□□□ 1.69
CACNA1FO60840 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CACNA1FO60840 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CACNA1FO60840 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CACNA1FO60840 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC25.58■■□□□ 1.69
CACNA1FO60840 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CACNA1FO60840 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CACNA1FO60840 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CACNA1FO60840 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC25.58■■□□□ 1.69
CACNA1FO60840 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CACNA1FO60840 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CACNA1FO60840 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.68
CACNA1FO60840 BX119927.1-201ENST00000636596 1552 ntBASIC25.58■■□□□ 1.68
CACNA1FO60840 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC25.58■■□□□ 1.68
CACNA1FO60840 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CACNA1FO60840 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
CACNA1FO60840 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC25.57■■□□□ 1.68
CACNA1FO60840 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
CACNA1FO60840 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
CACNA1FO60840 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC25.57■■□□□ 1.68
CACNA1FO60840 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CACNA1FO60840 AL390719.1-204ENST00000412397 1219 ntBASIC25.57■■□□□ 1.68
CACNA1FO60840 AC006058.3-201ENST00000606217 1069 ntBASIC25.57■■□□□ 1.68
CACNA1FO60840 MMD2-204ENST00000612910 778 ntTSL 5 BASIC25.57■■□□□ 1.68
CACNA1FO60840 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC25.57■■□□□ 1.68
CACNA1FO60840 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
CACNA1FO60840 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CACNA1FO60840 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CACNA1FO60840 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
CACNA1FO60840 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
CACNA1FO60840 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CACNA1FO60840 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC25.56■■□□□ 1.68
CACNA1FO60840 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CACNA1FO60840 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CACNA1FO60840 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
CACNA1FO60840 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC25.56■■□□□ 1.68
CACNA1FO60840 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
CACNA1FO60840 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
CACNA1FO60840 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
CACNA1FO60840 AC233263.1-201ENST00000578059 224 ntBASIC25.56■■□□□ 1.68
CACNA1FO60840 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CACNA1FO60840 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC25.56■■□□□ 1.68
CACNA1FO60840 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CACNA1FO60840 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
CACNA1FO60840 KRT8P17-201ENST00000453110 1448 ntBASIC25.55■■□□□ 1.68
CACNA1FO60840 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC25.55■■□□□ 1.68
CACNA1FO60840 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC25.55■■□□□ 1.68
CACNA1FO60840 AC142381.4-202ENST00000563973 229 ntBASIC25.55■■□□□ 1.68
CACNA1FO60840 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC25.55■■□□□ 1.68
CACNA1FO60840 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC25.55■■□□□ 1.68
CACNA1FO60840 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
CACNA1FO60840 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC25.55■■□□□ 1.68
CACNA1FO60840 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CACNA1FO60840 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CACNA1FO60840 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
CACNA1FO60840 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC25.55■■□□□ 1.68
CACNA1FO60840 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CACNA1FO60840 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC25.55■■□□□ 1.68
CACNA1FO60840 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC25.55■■□□□ 1.68
CACNA1FO60840 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
CACNA1FO60840 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CACNA1FO60840 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
CACNA1FO60840 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms