Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TMX2-CTNND1H3BSU7 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
TMX2-CTNND1H3BSU7 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.81■□□□□ 0.76
TMX2-CTNND1H3BSU7 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.81■□□□□ 0.76
TMX2-CTNND1H3BSU7 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.81■□□□□ 0.76
TMX2-CTNND1H3BSU7 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.81■□□□□ 0.76
TMX2-CTNND1H3BSU7 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
TMX2-CTNND1H3BSU7 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.81■□□□□ 0.76
TMX2-CTNND1H3BSU7 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.81■□□□□ 0.76
TMX2-CTNND1H3BSU7 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.81■□□□□ 0.76
TMX2-CTNND1H3BSU7 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.81■□□□□ 0.76
TMX2-CTNND1H3BSU7 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.81■□□□□ 0.76
TMX2-CTNND1H3BSU7 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.81■□□□□ 0.76
TMX2-CTNND1H3BSU7 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.81■□□□□ 0.76
TMX2-CTNND1H3BSU7 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.81■□□□□ 0.76
TMX2-CTNND1H3BSU7 AL359736.2-201ENST00000621992 437 ntBASIC19.81■□□□□ 0.76
TMX2-CTNND1H3BSU7 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
TMX2-CTNND1H3BSU7 FAM197Y4-202ENST00000622692 608 ntBASIC19.81■□□□□ 0.76
TMX2-CTNND1H3BSU7 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
TMX2-CTNND1H3BSU7 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TMX2-CTNND1H3BSU7 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TMX2-CTNND1H3BSU7 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TMX2-CTNND1H3BSU7 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TMX2-CTNND1H3BSU7 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.81■□□□□ 0.76
TMX2-CTNND1H3BSU7 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
TMX2-CTNND1H3BSU7 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TMX2-CTNND1H3BSU7 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TMX2-CTNND1H3BSU7 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TMX2-CTNND1H3BSU7 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.8■□□□□ 0.76
TMX2-CTNND1H3BSU7 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TMX2-CTNND1H3BSU7 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TMX2-CTNND1H3BSU7 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.8■□□□□ 0.76
TMX2-CTNND1H3BSU7 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TMX2-CTNND1H3BSU7 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TMX2-CTNND1H3BSU7 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TMX2-CTNND1H3BSU7 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TMX2-CTNND1H3BSU7 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
TMX2-CTNND1H3BSU7 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TMX2-CTNND1H3BSU7 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.8■□□□□ 0.76
TMX2-CTNND1H3BSU7 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.8■□□□□ 0.76
TMX2-CTNND1H3BSU7 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.8■□□□□ 0.76
TMX2-CTNND1H3BSU7 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.8■□□□□ 0.76
TMX2-CTNND1H3BSU7 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TMX2-CTNND1H3BSU7 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.8■□□□□ 0.76
TMX2-CTNND1H3BSU7 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TMX2-CTNND1H3BSU7 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TMX2-CTNND1H3BSU7 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.8■□□□□ 0.76
TMX2-CTNND1H3BSU7 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.8■□□□□ 0.76
TMX2-CTNND1H3BSU7 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
TMX2-CTNND1H3BSU7 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
TMX2-CTNND1H3BSU7 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TMX2-CTNND1H3BSU7 PKD1P6-201ENST00000343738 4769 ntBASIC19.79■□□□□ 0.76
TMX2-CTNND1H3BSU7 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TMX2-CTNND1H3BSU7 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TMX2-CTNND1H3BSU7 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TMX2-CTNND1H3BSU7 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TMX2-CTNND1H3BSU7 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.79■□□□□ 0.76
TMX2-CTNND1H3BSU7 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.79■□□□□ 0.76
TMX2-CTNND1H3BSU7 AL596275.1-201ENST00000423464 877 ntBASIC19.79■□□□□ 0.76
TMX2-CTNND1H3BSU7 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.79■□□□□ 0.76
TMX2-CTNND1H3BSU7 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.79■□□□□ 0.76
TMX2-CTNND1H3BSU7 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
TMX2-CTNND1H3BSU7 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
TMX2-CTNND1H3BSU7 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.79■□□□□ 0.76
TMX2-CTNND1H3BSU7 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
TMX2-CTNND1H3BSU7 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TMX2-CTNND1H3BSU7 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
TMX2-CTNND1H3BSU7 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.79■□□□□ 0.76
TMX2-CTNND1H3BSU7 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TMX2-CTNND1H3BSU7 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TMX2-CTNND1H3BSU7 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TMX2-CTNND1H3BSU7 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TMX2-CTNND1H3BSU7 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
TMX2-CTNND1H3BSU7 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
TMX2-CTNND1H3BSU7 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
TMX2-CTNND1H3BSU7 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TMX2-CTNND1H3BSU7 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TMX2-CTNND1H3BSU7 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TMX2-CTNND1H3BSU7 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.78■□□□□ 0.76
TMX2-CTNND1H3BSU7 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TMX2-CTNND1H3BSU7 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.78■□□□□ 0.76
TMX2-CTNND1H3BSU7 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TMX2-CTNND1H3BSU7 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
TMX2-CTNND1H3BSU7 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
TMX2-CTNND1H3BSU7 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TMX2-CTNND1H3BSU7 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TMX2-CTNND1H3BSU7 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
TMX2-CTNND1H3BSU7 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.78■□□□□ 0.76
TMX2-CTNND1H3BSU7 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.78■□□□□ 0.76
TMX2-CTNND1H3BSU7 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
TMX2-CTNND1H3BSU7 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TMX2-CTNND1H3BSU7 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TMX2-CTNND1H3BSU7 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TMX2-CTNND1H3BSU7 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TMX2-CTNND1H3BSU7 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TMX2-CTNND1H3BSU7 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TMX2-CTNND1H3BSU7 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.77■□□□□ 0.76
TMX2-CTNND1H3BSU7 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.77■□□□□ 0.76
TMX2-CTNND1H3BSU7 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TMX2-CTNND1H3BSU7 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms