Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.41■□□□□ 0.7
RNF103-CHMP3A0A140T963 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.41■□□□□ 0.7
RNF103-CHMP3A0A140T963 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF103-CHMP3A0A140T963 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.41■□□□□ 0.7
RNF103-CHMP3A0A140T963 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.41■□□□□ 0.7
RNF103-CHMP3A0A140T963 AC120498.10-201ENST00000621827 505 ntBASIC19.41■□□□□ 0.7
RNF103-CHMP3A0A140T963 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF103-CHMP3A0A140T963 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RNF103-CHMP3A0A140T963 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF103-CHMP3A0A140T963 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF103-CHMP3A0A140T963 HCG11-201ENST00000411553 5696 ntBASIC19.41■□□□□ 0.7
RNF103-CHMP3A0A140T963 KRT16P2-201ENST00000414673 1423 ntBASIC19.41■□□□□ 0.7
RNF103-CHMP3A0A140T963 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RNF103-CHMP3A0A140T963 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF103-CHMP3A0A140T963 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RNF103-CHMP3A0A140T963 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
RNF103-CHMP3A0A140T963 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.4■□□□□ 0.7
RNF103-CHMP3A0A140T963 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.4■□□□□ 0.7
RNF103-CHMP3A0A140T963 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF103-CHMP3A0A140T963 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF103-CHMP3A0A140T963 FP700111.2-201ENST00000619190 1892 ntBASIC19.4■□□□□ 0.7
RNF103-CHMP3A0A140T963 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.4■□□□□ 0.7
RNF103-CHMP3A0A140T963 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.4■□□□□ 0.7
RNF103-CHMP3A0A140T963 AC245052.3-201ENST00000450182 901 ntBASIC19.4■□□□□ 0.7
RNF103-CHMP3A0A140T963 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.4■□□□□ 0.7
RNF103-CHMP3A0A140T963 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.4■□□□□ 0.7
RNF103-CHMP3A0A140T963 AC104187.1-201ENST00000607510 612 ntBASIC19.4■□□□□ 0.7
RNF103-CHMP3A0A140T963 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RNF103-CHMP3A0A140T963 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
RNF103-CHMP3A0A140T963 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RNF103-CHMP3A0A140T963 AL512408.1-201ENST00000569378 2000 ntBASIC19.4■□□□□ 0.7
RNF103-CHMP3A0A140T963 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RNF103-CHMP3A0A140T963 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF103-CHMP3A0A140T963 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF103-CHMP3A0A140T963 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.39■□□□□ 0.7
RNF103-CHMP3A0A140T963 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
RNF103-CHMP3A0A140T963 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RNF103-CHMP3A0A140T963 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RNF103-CHMP3A0A140T963 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RNF103-CHMP3A0A140T963 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RNF103-CHMP3A0A140T963 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
RNF103-CHMP3A0A140T963 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF103-CHMP3A0A140T963 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF103-CHMP3A0A140T963 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF103-CHMP3A0A140T963 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.39■□□□□ 0.69
RNF103-CHMP3A0A140T963 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
RNF103-CHMP3A0A140T963 AC123595.1-201ENST00000440769 1046 ntBASIC19.39■□□□□ 0.69
RNF103-CHMP3A0A140T963 YBX1P1-201ENST00000445822 960 ntBASIC19.39■□□□□ 0.69
RNF103-CHMP3A0A140T963 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.39■□□□□ 0.69
RNF103-CHMP3A0A140T963 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.39■□□□□ 0.69
RNF103-CHMP3A0A140T963 DUX4L2-201ENST00000561772 1275 ntBASIC19.39■□□□□ 0.69
RNF103-CHMP3A0A140T963 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.39■□□□□ 0.69
RNF103-CHMP3A0A140T963 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.39■□□□□ 0.69
RNF103-CHMP3A0A140T963 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.39■□□□□ 0.69
RNF103-CHMP3A0A140T963 DUX4L6-201ENST00000626483 1275 ntBASIC19.39■□□□□ 0.69
RNF103-CHMP3A0A140T963 DUX4L1-201ENST00000627662 1275 ntBASIC19.39■□□□□ 0.69
RNF103-CHMP3A0A140T963 DUX4L8-201ENST00000629013 1275 ntBASIC19.39■□□□□ 0.69
RNF103-CHMP3A0A140T963 DUX4L3-201ENST00000630187 1275 ntBASIC19.39■□□□□ 0.69
RNF103-CHMP3A0A140T963 DUX4L7-201ENST00000630678 1275 ntBASIC19.39■□□□□ 0.69
RNF103-CHMP3A0A140T963 DUX4L5-201ENST00000630834 1275 ntBASIC19.39■□□□□ 0.69
RNF103-CHMP3A0A140T963 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF103-CHMP3A0A140T963 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF103-CHMP3A0A140T963 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.39■□□□□ 0.69
RNF103-CHMP3A0A140T963 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF103-CHMP3A0A140T963 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.69
RNF103-CHMP3A0A140T963 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF103-CHMP3A0A140T963 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF103-CHMP3A0A140T963 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
RNF103-CHMP3A0A140T963 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
RNF103-CHMP3A0A140T963 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
RNF103-CHMP3A0A140T963 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RNF103-CHMP3A0A140T963 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
RNF103-CHMP3A0A140T963 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF103-CHMP3A0A140T963 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
RNF103-CHMP3A0A140T963 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF103-CHMP3A0A140T963 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF103-CHMP3A0A140T963 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF103-CHMP3A0A140T963 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF103-CHMP3A0A140T963 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RNF103-CHMP3A0A140T963 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF103-CHMP3A0A140T963 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.38■□□□□ 0.69
RNF103-CHMP3A0A140T963 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF103-CHMP3A0A140T963 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
RNF103-CHMP3A0A140T963 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.38■□□□□ 0.69
RNF103-CHMP3A0A140T963 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF103-CHMP3A0A140T963 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RNF103-CHMP3A0A140T963 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.38■□□□□ 0.69
RNF103-CHMP3A0A140T963 AL162377.1-201ENST00000618844 1793 ntBASIC19.38■□□□□ 0.69
RNF103-CHMP3A0A140T963 RARRES2P11-201ENST00000635158 484 ntBASIC19.38■□□□□ 0.69
RNF103-CHMP3A0A140T963 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF103-CHMP3A0A140T963 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.38■□□□□ 0.69
RNF103-CHMP3A0A140T963 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF103-CHMP3A0A140T963 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF103-CHMP3A0A140T963 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF103-CHMP3A0A140T963 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
RNF103-CHMP3A0A140T963 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
RNF103-CHMP3A0A140T963 AC018445.3-201ENST00000624177 1945 ntBASIC19.37■□□□□ 0.69
RNF103-CHMP3A0A140T963 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
RNF103-CHMP3A0A140T963 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.37■□□□□ 0.69
RNF103-CHMP3A0A140T963 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms