Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.22■□□□□ 0.99
LRRC3Q9BY71 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRRC3Q9BY71 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.22■□□□□ 0.99
LRRC3Q9BY71 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
LRRC3Q9BY71 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.21■□□□□ 0.99
LRRC3Q9BY71 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRRC3Q9BY71 KRT8P36-201ENST00000489121 1440 ntBASIC21.21■□□□□ 0.99
LRRC3Q9BY71 FBXW4P1-201ENST00000426721 2239 ntBASIC21.21■□□□□ 0.99
LRRC3Q9BY71 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRRC3Q9BY71 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRRC3Q9BY71 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.21■□□□□ 0.99
LRRC3Q9BY71 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRRC3Q9BY71 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRRC3Q9BY71 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRRC3Q9BY71 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.21■□□□□ 0.99
LRRC3Q9BY71 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LRRC3Q9BY71 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LRRC3Q9BY71 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LRRC3Q9BY71 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
LRRC3Q9BY71 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.21■□□□□ 0.99
LRRC3Q9BY71 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LRRC3Q9BY71 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21.21■□□□□ 0.99
LRRC3Q9BY71 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LRRC3Q9BY71 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LRRC3Q9BY71 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21.21■□□□□ 0.99
LRRC3Q9BY71 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC21.21■□□□□ 0.99
LRRC3Q9BY71 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.21■□□□□ 0.99
LRRC3Q9BY71 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRRC3Q9BY71 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRRC3Q9BY71 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
LRRC3Q9BY71 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
LRRC3Q9BY71 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRRC3Q9BY71 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.2■□□□□ 0.98
LRRC3Q9BY71 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
LRRC3Q9BY71 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.2■□□□□ 0.98
LRRC3Q9BY71 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRRC3Q9BY71 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRRC3Q9BY71 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRRC3Q9BY71 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LRRC3Q9BY71 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.2■□□□□ 0.98
LRRC3Q9BY71 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21.2■□□□□ 0.98
LRRC3Q9BY71 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LRRC3Q9BY71 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LRRC3Q9BY71 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LRRC3Q9BY71 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRRC3Q9BY71 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRRC3Q9BY71 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRRC3Q9BY71 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LRRC3Q9BY71 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.19■□□□□ 0.98
LRRC3Q9BY71 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.19■□□□□ 0.98
LRRC3Q9BY71 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRRC3Q9BY71 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
LRRC3Q9BY71 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRRC3Q9BY71 AL390719.1-204ENST00000412397 1219 ntBASIC21.19■□□□□ 0.98
LRRC3Q9BY71 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRRC3Q9BY71 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LRRC3Q9BY71 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.19■□□□□ 0.98
LRRC3Q9BY71 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.19■□□□□ 0.98
LRRC3Q9BY71 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.19■□□□□ 0.98
LRRC3Q9BY71 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
LRRC3Q9BY71 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.19■□□□□ 0.98
LRRC3Q9BY71 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
LRRC3Q9BY71 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LRRC3Q9BY71 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
LRRC3Q9BY71 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.19■□□□□ 0.98
LRRC3Q9BY71 AL024507.2-201ENST00000606070 2574 ntBASIC21.19■□□□□ 0.98
LRRC3Q9BY71 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
LRRC3Q9BY71 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LRRC3Q9BY71 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
LRRC3Q9BY71 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRRC3Q9BY71 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.18■□□□□ 0.98
LRRC3Q9BY71 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LRRC3Q9BY71 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
LRRC3Q9BY71 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRRC3Q9BY71 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRRC3Q9BY71 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.18■□□□□ 0.98
LRRC3Q9BY71 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
LRRC3Q9BY71 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
LRRC3Q9BY71 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.18■□□□□ 0.98
LRRC3Q9BY71 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRRC3Q9BY71 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRRC3Q9BY71 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
LRRC3Q9BY71 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRRC3Q9BY71 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.18■□□□□ 0.98
LRRC3Q9BY71 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRRC3Q9BY71 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.18■□□□□ 0.98
LRRC3Q9BY71 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LRRC3Q9BY71 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRRC3Q9BY71 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRRC3Q9BY71 AL049796.1-201ENST00000565336 1766 ntBASIC21.18■□□□□ 0.98
LRRC3Q9BY71 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LRRC3Q9BY71 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.18■□□□□ 0.98
LRRC3Q9BY71 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
LRRC3Q9BY71 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRRC3Q9BY71 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRRC3Q9BY71 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
LRRC3Q9BY71 SNORA78-201ENST00000459373 127 ntBASIC21.17■□□□□ 0.98
LRRC3Q9BY71 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC21.17■□□□□ 0.98
LRRC3Q9BY71 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC21.17■□□□□ 0.98
LRRC3Q9BY71 AC233702.5-201ENST00000584107 538 ntBASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms