Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
LINC01006Q8NI28 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC15.85■□□□□ 0.13
LINC01006Q8NI28 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LINC01006Q8NI28 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC15.85■□□□□ 0.13
LINC01006Q8NI28 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
LINC01006Q8NI28 SNX21-213ENST00000614929 587 ntTSL 5 BASIC15.85■□□□□ 0.13
LINC01006Q8NI28 AC133561.5-201ENST00000635547 218 ntBASIC15.85■□□□□ 0.13
LINC01006Q8NI28 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC01006Q8NI28 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
LINC01006Q8NI28 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
LINC01006Q8NI28 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC01006Q8NI28 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC15.85■□□□□ 0.13
LINC01006Q8NI28 AC027702.1-201ENST00000563810 1770 ntBASIC15.85■□□□□ 0.13
LINC01006Q8NI28 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC15.85■□□□□ 0.13
LINC01006Q8NI28 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
LINC01006Q8NI28 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LINC01006Q8NI28 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
LINC01006Q8NI28 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
LINC01006Q8NI28 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LINC01006Q8NI28 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LINC01006Q8NI28 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
LINC01006Q8NI28 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
LINC01006Q8NI28 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LINC01006Q8NI28 AC087499.1-201ENST00000418141 1075 ntBASIC15.84■□□□□ 0.13
LINC01006Q8NI28 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LINC01006Q8NI28 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC15.84■□□□□ 0.13
LINC01006Q8NI28 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
LINC01006Q8NI28 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC15.84■□□□□ 0.13
LINC01006Q8NI28 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC15.84■□□□□ 0.13
LINC01006Q8NI28 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LINC01006Q8NI28 KRT18P21-201ENST00000515767 1272 ntBASIC15.84■□□□□ 0.13
LINC01006Q8NI28 AL355075.4-201ENST00000554988 638 ntBASIC15.84■□□□□ 0.13
LINC01006Q8NI28 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
LINC01006Q8NI28 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
LINC01006Q8NI28 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
LINC01006Q8NI28 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC15.84■□□□□ 0.13
LINC01006Q8NI28 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LINC01006Q8NI28 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LINC01006Q8NI28 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC15.84■□□□□ 0.13
LINC01006Q8NI28 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LINC01006Q8NI28 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
LINC01006Q8NI28 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC15.83■□□□□ 0.13
LINC01006Q8NI28 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LINC01006Q8NI28 AC244015.2-201ENST00000616358 1861 ntBASIC15.83■□□□□ 0.12
LINC01006Q8NI28 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LINC01006Q8NI28 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC15.83■□□□□ 0.12
LINC01006Q8NI28 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC15.83■□□□□ 0.12
LINC01006Q8NI28 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LINC01006Q8NI28 Six3os1_6.1-201ENST00000620790 196 ntBASIC15.83■□□□□ 0.12
LINC01006Q8NI28 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
LINC01006Q8NI28 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
LINC01006Q8NI28 LSR-203ENST00000360798 1963 ntTSL 2 BASIC15.83■□□□□ 0.12
LINC01006Q8NI28 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LINC01006Q8NI28 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
LINC01006Q8NI28 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LINC01006Q8NI28 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC15.82■□□□□ 0.12
LINC01006Q8NI28 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LINC01006Q8NI28 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LINC01006Q8NI28 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
LINC01006Q8NI28 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LINC01006Q8NI28 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC15.82■□□□□ 0.12
LINC01006Q8NI28 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LINC01006Q8NI28 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LINC01006Q8NI28 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LINC01006Q8NI28 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LINC01006Q8NI28 SAPCD2P4-201ENST00000424595 1171 ntBASIC15.82■□□□□ 0.12
LINC01006Q8NI28 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC15.82■□□□□ 0.12
LINC01006Q8NI28 MAX-217ENST00000557277 728 ntTSL 3 BASIC15.82■□□□□ 0.12
LINC01006Q8NI28 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC15.82■□□□□ 0.12
LINC01006Q8NI28 AC010331.1-201ENST00000611423 582 ntBASIC15.82■□□□□ 0.12
LINC01006Q8NI28 MIR2861-201ENST00000636310 90 ntBASIC15.82■□□□□ 0.12
LINC01006Q8NI28 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC15.82■□□□□ 0.12
LINC01006Q8NI28 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LINC01006Q8NI28 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC15.82■□□□□ 0.12
LINC01006Q8NI28 KRT8P36-201ENST00000489121 1440 ntBASIC15.82■□□□□ 0.12
LINC01006Q8NI28 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC15.82■□□□□ 0.12
LINC01006Q8NI28 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC15.82■□□□□ 0.12
LINC01006Q8NI28 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
LINC01006Q8NI28 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LINC01006Q8NI28 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC15.82■□□□□ 0.12
LINC01006Q8NI28 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LINC01006Q8NI28 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC15.82■□□□□ 0.12
LINC01006Q8NI28 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LINC01006Q8NI28 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
LINC01006Q8NI28 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LINC01006Q8NI28 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
LINC01006Q8NI28 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
LINC01006Q8NI28 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC15.81■□□□□ 0.12
LINC01006Q8NI28 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LINC01006Q8NI28 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LINC01006Q8NI28 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LINC01006Q8NI28 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC15.81■□□□□ 0.12
LINC01006Q8NI28 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LINC01006Q8NI28 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LINC01006Q8NI28 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LINC01006Q8NI28 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LINC01006Q8NI28 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LINC01006Q8NI28 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
LINC01006Q8NI28 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC15.81■□□□□ 0.12
LINC01006Q8NI28 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms