Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.03■□□□□ 0.32
VPS13CQ709C8 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
VPS13CQ709C8 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
VPS13CQ709C8 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC17.03■□□□□ 0.32
VPS13CQ709C8 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.03■□□□□ 0.32
VPS13CQ709C8 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
VPS13CQ709C8 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.03■□□□□ 0.32
VPS13CQ709C8 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
VPS13CQ709C8 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.03■□□□□ 0.32
VPS13CQ709C8 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.03■□□□□ 0.32
VPS13CQ709C8 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.03■□□□□ 0.32
VPS13CQ709C8 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.03■□□□□ 0.32
VPS13CQ709C8 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VPS13CQ709C8 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
VPS13CQ709C8 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.03■□□□□ 0.32
VPS13CQ709C8 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
VPS13CQ709C8 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.03■□□□□ 0.32
VPS13CQ709C8 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VPS13CQ709C8 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.03■□□□□ 0.32
VPS13CQ709C8 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.03■□□□□ 0.32
VPS13CQ709C8 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.03■□□□□ 0.32
VPS13CQ709C8 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
VPS13CQ709C8 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VPS13CQ709C8 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.03■□□□□ 0.32
VPS13CQ709C8 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VPS13CQ709C8 RBM17P1-201ENST00000453646 1190 ntBASIC17.02■□□□□ 0.32
VPS13CQ709C8 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VPS13CQ709C8 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
VPS13CQ709C8 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
VPS13CQ709C8 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.02■□□□□ 0.32
VPS13CQ709C8 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VPS13CQ709C8 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
VPS13CQ709C8 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.02■□□□□ 0.31
VPS13CQ709C8 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.02■□□□□ 0.31
VPS13CQ709C8 KRT16P5-201ENST00000455284 522 ntBASIC17.02■□□□□ 0.31
VPS13CQ709C8 AP000525.1-201ENST00000608286 694 ntBASIC17.02■□□□□ 0.31
VPS13CQ709C8 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
VPS13CQ709C8 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
VPS13CQ709C8 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VPS13CQ709C8 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VPS13CQ709C8 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VPS13CQ709C8 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VPS13CQ709C8 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.01■□□□□ 0.31
VPS13CQ709C8 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VPS13CQ709C8 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VPS13CQ709C8 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
VPS13CQ709C8 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.01■□□□□ 0.31
VPS13CQ709C8 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.01■□□□□ 0.31
VPS13CQ709C8 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.01■□□□□ 0.31
VPS13CQ709C8 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
VPS13CQ709C8 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.01■□□□□ 0.31
VPS13CQ709C8 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC17.01■□□□□ 0.31
VPS13CQ709C8 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
VPS13CQ709C8 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
VPS13CQ709C8 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
VPS13CQ709C8 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.01■□□□□ 0.31
VPS13CQ709C8 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
VPS13CQ709C8 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VPS13CQ709C8 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VPS13CQ709C8 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VPS13CQ709C8 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC17■□□□□ 0.31
VPS13CQ709C8 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VPS13CQ709C8 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
VPS13CQ709C8 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17■□□□□ 0.31
VPS13CQ709C8 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VPS13CQ709C8 CRYGFP-201ENST00000418459 633 ntBASIC17■□□□□ 0.31
VPS13CQ709C8 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17■□□□□ 0.31
VPS13CQ709C8 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17■□□□□ 0.31
VPS13CQ709C8 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17■□□□□ 0.31
VPS13CQ709C8 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17■□□□□ 0.31
VPS13CQ709C8 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17■□□□□ 0.31
VPS13CQ709C8 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17■□□□□ 0.31
VPS13CQ709C8 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17■□□□□ 0.31
VPS13CQ709C8 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17■□□□□ 0.31
VPS13CQ709C8 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
VPS13CQ709C8 UPK3BP1-201ENST00000428678 509 ntBASIC16.99■□□□□ 0.31
VPS13CQ709C8 SLC25A3P1-201ENST00000443844 931 ntBASIC16.99■□□□□ 0.31
VPS13CQ709C8 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
VPS13CQ709C8 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VPS13CQ709C8 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
VPS13CQ709C8 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC16.99■□□□□ 0.31
VPS13CQ709C8 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.99■□□□□ 0.31
VPS13CQ709C8 FAM197Y1-201ENST00000421178 764 ntBASIC16.99■□□□□ 0.31
VPS13CQ709C8 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.99■□□□□ 0.31
VPS13CQ709C8 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.99■□□□□ 0.31
VPS13CQ709C8 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
VPS13CQ709C8 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VPS13CQ709C8 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VPS13CQ709C8 AL353807.1-201ENST00000427475 662 ntBASIC16.99■□□□□ 0.31
VPS13CQ709C8 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
VPS13CQ709C8 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.99■□□□□ 0.31
VPS13CQ709C8 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
VPS13CQ709C8 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VPS13CQ709C8 AL390955.1-201ENST00000428694 934 ntBASIC16.98■□□□□ 0.31
VPS13CQ709C8 AC009947.2-201ENST00000444014 672 ntBASIC16.98■□□□□ 0.31
VPS13CQ709C8 AC110285.5-201ENST00000611501 352 ntBASIC16.98■□□□□ 0.31
VPS13CQ709C8 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VPS13CQ709C8 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
VPS13CQ709C8 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VPS13CQ709C8 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms