Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.66■□□□□ 0.42
CHRFAM7AQ494W8 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRFAM7AQ494W8 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CHRFAM7AQ494W8 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRFAM7AQ494W8 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRFAM7AQ494W8 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CHRFAM7AQ494W8 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
CHRFAM7AQ494W8 AC009237.3-201ENST00000393279 1427 ntBASIC17.65■□□□□ 0.42
CHRFAM7AQ494W8 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRFAM7AQ494W8 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC17.65■□□□□ 0.42
CHRFAM7AQ494W8 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRFAM7AQ494W8 AC005224.4-201ENST00000583262 1652 ntBASIC17.65■□□□□ 0.42
CHRFAM7AQ494W8 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CHRFAM7AQ494W8 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRFAM7AQ494W8 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CHRFAM7AQ494W8 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHRFAM7AQ494W8 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRFAM7AQ494W8 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRFAM7AQ494W8 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHRFAM7AQ494W8 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CHRFAM7AQ494W8 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRFAM7AQ494W8 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.65■□□□□ 0.42
CHRFAM7AQ494W8 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.65■□□□□ 0.42
CHRFAM7AQ494W8 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRFAM7AQ494W8 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHRFAM7AQ494W8 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRFAM7AQ494W8 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHRFAM7AQ494W8 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHRFAM7AQ494W8 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRFAM7AQ494W8 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CHRFAM7AQ494W8 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRFAM7AQ494W8 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
CHRFAM7AQ494W8 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
CHRFAM7AQ494W8 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHRFAM7AQ494W8 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHRFAM7AQ494W8 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.64■□□□□ 0.41
CHRFAM7AQ494W8 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHRFAM7AQ494W8 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CHRFAM7AQ494W8 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHRFAM7AQ494W8 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHRFAM7AQ494W8 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHRFAM7AQ494W8 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.64■□□□□ 0.41
CHRFAM7AQ494W8 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.64■□□□□ 0.41
CHRFAM7AQ494W8 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHRFAM7AQ494W8 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CHRFAM7AQ494W8 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.64■□□□□ 0.41
CHRFAM7AQ494W8 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.64■□□□□ 0.41
CHRFAM7AQ494W8 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.64■□□□□ 0.41
CHRFAM7AQ494W8 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHRFAM7AQ494W8 AP001160.3-201ENST00000601484 763 ntBASIC17.64■□□□□ 0.41
CHRFAM7AQ494W8 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHRFAM7AQ494W8 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHRFAM7AQ494W8 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHRFAM7AQ494W8 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CHRFAM7AQ494W8 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHRFAM7AQ494W8 AP005212.1-201ENST00000581547 1997 ntBASIC17.64■□□□□ 0.41
CHRFAM7AQ494W8 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHRFAM7AQ494W8 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHRFAM7AQ494W8 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CHRFAM7AQ494W8 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.64■□□□□ 0.41
CHRFAM7AQ494W8 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHRFAM7AQ494W8 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHRFAM7AQ494W8 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CHRFAM7AQ494W8 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHRFAM7AQ494W8 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.63■□□□□ 0.41
CHRFAM7AQ494W8 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.63■□□□□ 0.41
CHRFAM7AQ494W8 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHRFAM7AQ494W8 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
CHRFAM7AQ494W8 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHRFAM7AQ494W8 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHRFAM7AQ494W8 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
CHRFAM7AQ494W8 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.63■□□□□ 0.41
CHRFAM7AQ494W8 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.63■□□□□ 0.41
CHRFAM7AQ494W8 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.63■□□□□ 0.41
CHRFAM7AQ494W8 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.63■□□□□ 0.41
CHRFAM7AQ494W8 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.63■□□□□ 0.41
CHRFAM7AQ494W8 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHRFAM7AQ494W8 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHRFAM7AQ494W8 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHRFAM7AQ494W8 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHRFAM7AQ494W8 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHRFAM7AQ494W8 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHRFAM7AQ494W8 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.62■□□□□ 0.41
CHRFAM7AQ494W8 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHRFAM7AQ494W8 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CHRFAM7AQ494W8 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHRFAM7AQ494W8 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHRFAM7AQ494W8 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.62■□□□□ 0.41
CHRFAM7AQ494W8 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CHRFAM7AQ494W8 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHRFAM7AQ494W8 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHRFAM7AQ494W8 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHRFAM7AQ494W8 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHRFAM7AQ494W8 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHRFAM7AQ494W8 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.62■□□□□ 0.41
CHRFAM7AQ494W8 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHRFAM7AQ494W8 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHRFAM7AQ494W8 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHRFAM7AQ494W8 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CHRFAM7AQ494W8 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms