Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cks1bP61025 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cks1bP61025 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cks1bP61025 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cks1bP61025 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cks1bP61025 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cks1bP61025 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cks1bP61025 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cks1bP61025 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cks1bP61025 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cks1bP61025 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cks1bP61025 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cks1bP61025 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cks1bP61025 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Cks1bP61025 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cks1bP61025 Gm14117-201ENSMUST00000122417 843 ntBASIC12.54□□□□□ -0.4
Cks1bP61025 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cks1bP61025 Gm7160-202ENSMUST00000188519 1027 ntBASIC12.54□□□□□ -0.4
Cks1bP61025 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cks1bP61025 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cks1bP61025 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Cks1bP61025 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cks1bP61025 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cks1bP61025 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cks1bP61025 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC12.54□□□□□ -0.4
Cks1bP61025 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC12.54□□□□□ -0.4
Cks1bP61025 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cks1bP61025 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cks1bP61025 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cks1bP61025 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cks1bP61025 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Cks1bP61025 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cks1bP61025 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cks1bP61025 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cks1bP61025 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cks1bP61025 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cks1bP61025 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cks1bP61025 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cks1bP61025 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cks1bP61025 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cks1bP61025 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cks1bP61025 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cks1bP61025 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cks1bP61025 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cks1bP61025 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cks1bP61025 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cks1bP61025 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cks1bP61025 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cks1bP61025 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cks1bP61025 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Cks1bP61025 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cks1bP61025 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC12.53□□□□□ -0.4
Cks1bP61025 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cks1bP61025 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cks1bP61025 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cks1bP61025 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cks1bP61025 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cks1bP61025 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cks1bP61025 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cks1bP61025 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC12.53□□□□□ -0.4
Cks1bP61025 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cks1bP61025 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC12.53□□□□□ -0.4
Cks1bP61025 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Cks1bP61025 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cks1bP61025 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cks1bP61025 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cks1bP61025 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cks1bP61025 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cks1bP61025 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cks1bP61025 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cks1bP61025 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.4
Cks1bP61025 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cks1bP61025 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cks1bP61025 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cks1bP61025 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Cks1bP61025 Gm43672-201ENSMUST00000199072 1731 ntBASIC12.52□□□□□ -0.41
Cks1bP61025 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cks1bP61025 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cks1bP61025 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cks1bP61025 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
Cks1bP61025 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cks1bP61025 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Cks1bP61025 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cks1bP61025 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Cks1bP61025 Gm12922-201ENSMUST00000120626 809 ntBASIC12.52□□□□□ -0.41
Cks1bP61025 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC12.52□□□□□ -0.41
Cks1bP61025 Gm45102-201ENSMUST00000207427 857 ntBASIC12.52□□□□□ -0.41
Cks1bP61025 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Cks1bP61025 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cks1bP61025 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cks1bP61025 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cks1bP61025 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cks1bP61025 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cks1bP61025 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC12.52□□□□□ -0.41
Cks1bP61025 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cks1bP61025 Gm43294-201ENSMUST00000202850 2490 ntBASIC12.52□□□□□ -0.41
Cks1bP61025 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cks1bP61025 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cks1bP61025 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cks1bP61025 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms