Protein–RNA interactions for Protein: P47111

VPS55, Vacuolar protein sorting-associated protein 55, yeastyeast

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS55P47111 KAR9YPL269W 1935 nt0.42□□□□□ -2.34
VPS55P47111 QCR9YGR183C 201 nt0.42□□□□□ -2.34
VPS55P47111 HYM1YKL189W 1200 nt0.42□□□□□ -2.34
VPS55P47111 CGI121YML036W 546 nt0.42□□□□□ -2.34
VPS55P47111 RPL9BYNL067W 576 nt0.42□□□□□ -2.34
VPS55P47111 YLL054CYLL054C 2532 nt0.42□□□□□ -2.34
VPS55P47111 UTP13YLR222C 2454 nt0.42□□□□□ -2.34
VPS55P47111 APL3YBL037W 3078 nt0.41□□□□□ -2.34
VPS55P47111 YCR024C-BYCR024C-B 267 nt0.41□□□□□ -2.34
VPS55P47111 PAU2YEL049W 363 nt0.41□□□□□ -2.34
VPS55P47111 PRM8YGL053W 714 nt0.41□□□□□ -2.34
VPS55P47111 PAU12YGR294W 363 nt0.41□□□□□ -2.34
VPS55P47111 HOT13YKL084W 351 nt0.41□□□□□ -2.34
VPS55P47111 PAU18YLL064C 363 nt0.41□□□□□ -2.34
VPS55P47111 SMD2YLR275W 333 nt0.41□□□□□ -2.34
VPS55P47111 PAU6YNR076W 363 nt0.41□□□□□ -2.34
VPS55P47111 YOR218CYOR218C 420 nt0.41□□□□□ -2.34
VPS55P47111 RTC6YPL183W-A 282 nt0.41□□□□□ -2.34
VPS55P47111 YBR224WYBR224W 516 nt0.41□□□□□ -2.34
VPS55P47111 GPX2YBR244W 489 nt0.41□□□□□ -2.34
VPS55P47111 SWT1YOR166C 1377 nt0.41□□□□□ -2.34
VPS55P47111 SPT21YMR179W 2277 nt0.4□□□□□ -2.34
VPS55P47111 CYC7YEL039C 342 nt0.4□□□□□ -2.35
VPS55P47111 SMB1YER029C 591 nt0.4□□□□□ -2.35
VPS55P47111 YGL258W-AYGL258W-A 234 nt0.4□□□□□ -2.35
VPS55P47111 YJR071WYJR071W 369 nt0.4□□□□□ -2.35
VPS55P47111 IZH4YOL101C 939 nt0.4□□□□□ -2.35
VPS55P47111 PEX34YCL056C 435 nt0.4□□□□□ -2.35
VPS55P47111 BRO1YPL084W 2535 nt0.39□□□□□ -2.35
VPS55P47111 YDR194W-AYDR194W-A 153 nt0.39□□□□□ -2.35
VPS55P47111 LSM4YER112W 564 nt0.39□□□□□ -2.35
VPS55P47111 YJL156W-AYJL156W-A 222 nt0.39□□□□□ -2.35
VPS55P47111 RCN1YKL159C 636 nt0.39□□□□□ -2.35
VPS55P47111 DDR48YMR173W 1293 nt0.39□□□□□ -2.35
VPS55P47111 FMP23YBR047W 528 nt0.39□□□□□ -2.35
VPS55P47111 PET20YPL159C 762 nt0.39□□□□□ -2.35
VPS55P47111 BI3Q0115 1554 nt0.38□□□□□ -2.35
VPS55P47111 YDR248CYDR248C 582 nt0.38□□□□□ -2.35
VPS55P47111 WIP1YDR374W-A 270 nt0.38□□□□□ -2.35
VPS55P47111 GEP7YGL057C 864 nt0.38□□□□□ -2.35
VPS55P47111 SAY1YGR263C 1275 nt0.38□□□□□ -2.35
VPS55P47111 SPO13YHR014W 876 nt0.38□□□□□ -2.35
VPS55P47111 YNL171CYNL171C 369 nt0.38□□□□□ -2.35
VPS55P47111 YOL014WYOL014W 375 nt0.38□□□□□ -2.35
VPS55P47111 PRP16YKR086W 3216 nt0.38□□□□□ -2.35
VPS55P47111 SLS1YLR139C 1932 nt0.38□□□□□ -2.35
VPS55P47111 ULP2YIL031W 3105 nt0.38□□□□□ -2.35
VPS55P47111 YDL009CYDL009C 324 nt0.37□□□□□ -2.35
VPS55P47111 SWF1YDR126W 1011 nt0.37□□□□□ -2.35
VPS55P47111 IRC14YOR135C 342 nt0.37□□□□□ -2.35
VPS55P47111 YPL034WYPL034W 498 nt0.37□□□□□ -2.35
VPS55P47111 TOF2YKR010C 2316 nt0.36□□□□□ -2.35
VPS55P47111 MXR1YER042W 555 nt0.36□□□□□ -2.35
VPS55P47111 YKL183C-AYKL183C-A 213 nt0.36□□□□□ -2.35
VPS55P47111 ICS2YBR157C 768 nt0.36□□□□□ -2.35
VPS55P47111 PEP3YLR148W 2757 nt0.35□□□□□ -2.35
VPS55P47111 DPB11YJL090C 2295 nt0.35□□□□□ -2.35
VPS55P47111 UBC9YDL064W 474 nt0.35□□□□□ -2.35
VPS55P47111 RPL38YLR325C 237 nt0.35□□□□□ -2.35
VPS55P47111 PHO80YOL001W 882 nt0.35□□□□□ -2.35
VPS55P47111 YOL118CYOL118C 309 nt0.35□□□□□ -2.35
VPS55P47111 YOR105WYOR105W 327 nt0.35□□□□□ -2.35
VPS55P47111 RIM20YOR275C 1986 nt0.35□□□□□ -2.35
VPS55P47111 FMP27YLR454W 7887 nt0.34□□□□□ -2.35
VPS55P47111 RAD6YGL058W 519 nt0.34□□□□□ -2.36
VPS55P47111 YGR242WYGR242W 309 nt0.34□□□□□ -2.36
VPS55P47111 SVP26YHR181W 687 nt0.34□□□□□ -2.36
VPS55P47111 SEC22YLR268W 645 nt0.34□□□□□ -2.36
VPS55P47111 YCL046WYCL046W 324 nt0.34□□□□□ -2.36
VPS55P47111 FIG4YNL325C 2640 nt0.34□□□□□ -2.36
VPS55P47111 NGG1YDR176W 2109 nt0.33□□□□□ -2.36
VPS55P47111 YEL010WYEL010W 351 nt0.33□□□□□ -2.36
VPS55P47111 GSP1YLR293C 660 nt0.33□□□□□ -2.36
VPS55P47111 RPS16AYMR143W 432 nt0.33□□□□□ -2.36
VPS55P47111 TRS65YGR166W 1683 nt0.33□□□□□ -2.36
VPS55P47111 NUP120YKL057C 3114 nt0.33□□□□□ -2.36
VPS55P47111 YGR265WYGR265W 411 nt0.32□□□□□ -2.36
VPS55P47111 YMR324CYMR324C 243 nt0.32□□□□□ -2.36
VPS55P47111 YOR169CYOR169C 465 nt0.32□□□□□ -2.36
VPS55P47111 ROX1YPR065W 1107 nt0.32□□□□□ -2.36
VPS55P47111 AI1Q0050 2505 nt0.32□□□□□ -2.36
VPS55P47111 YDL196WYDL196W 330 nt0.31□□□□□ -2.36
VPS55P47111 CRG1YHR209W 876 nt0.31□□□□□ -2.36
VPS55P47111 YIL030W-AYIL030W-A 339 nt0.31□□□□□ -2.36
VPS55P47111 YIL059CYIL059C 366 nt0.31□□□□□ -2.36
VPS55P47111 BET4YJL031C 984 nt0.31□□□□□ -2.36
VPS55P47111 SMD3YLR147C 306 nt0.31□□□□□ -2.36
VPS55P47111 YBR032WYBR032W 303 nt0.31□□□□□ -2.36
VPS55P47111 YBR221W-AYBR221W-A 105 nt0.31□□□□□ -2.36
VPS55P47111 LYS14YDR034C 2373 nt0.3□□□□□ -2.36
VPS55P47111 RTR2YDR066C 591 nt0.3□□□□□ -2.36
VPS55P47111 CHZ1YER030W 462 nt0.3□□□□□ -2.36
VPS55P47111 ECM12YHR021W-A 456 nt0.3□□□□□ -2.36
VPS55P47111 BMT5YIL096C 1011 nt0.3□□□□□ -2.36
VPS55P47111 UBX4YMR067C 1251 nt0.3□□□□□ -2.36
VPS55P47111 YBL073WYBL073W 312 nt0.3□□□□□ -2.36
VPS55P47111 YBR012CYBR012C 420 nt0.3□□□□□ -2.36
VPS55P47111 YDL206WYDL206W 2289 nt0.3□□□□□ -2.36
VPS55P47111 MPT5YGL178W 2580 nt0.29□□□□□ -2.36
VPS55P47111 GEA2YEL022W 4380 nt0.29□□□□□ -2.36
Retrieved 100 of 7,029 protein–RNA pairs in 24.3 ms