Protein–RNA interactions for Protein: O70591

Pfdn2, Prefoldin subunit 2, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn2O70591 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pfdn2O70591 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pfdn2O70591 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pfdn2O70591 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Pfdn2O70591 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Pfdn2O70591 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pfdn2O70591 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pfdn2O70591 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pfdn2O70591 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pfdn2O70591 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pfdn2O70591 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pfdn2O70591 Gm12251-201ENSMUST00000117893 792 ntBASIC14.67□□□□□ -0.06
Pfdn2O70591 Gm7860-201ENSMUST00000121190 879 ntBASIC14.67□□□□□ -0.06
Pfdn2O70591 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Pfdn2O70591 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pfdn2O70591 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pfdn2O70591 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pfdn2O70591 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pfdn2O70591 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pfdn2O70591 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pfdn2O70591 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Pfdn2O70591 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pfdn2O70591 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pfdn2O70591 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pfdn2O70591 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Pfdn2O70591 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pfdn2O70591 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pfdn2O70591 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pfdn2O70591 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC14.66□□□□□ -0.06
Pfdn2O70591 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pfdn2O70591 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pfdn2O70591 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pfdn2O70591 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Pfdn2O70591 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pfdn2O70591 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pfdn2O70591 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pfdn2O70591 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pfdn2O70591 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pfdn2O70591 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pfdn2O70591 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pfdn2O70591 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pfdn2O70591 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pfdn2O70591 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC14.66□□□□□ -0.06
Pfdn2O70591 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC14.66□□□□□ -0.06
Pfdn2O70591 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pfdn2O70591 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Pfdn2O70591 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pfdn2O70591 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pfdn2O70591 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pfdn2O70591 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pfdn2O70591 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pfdn2O70591 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.66□□□□□ -0.06
Pfdn2O70591 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pfdn2O70591 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pfdn2O70591 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pfdn2O70591 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.65□□□□□ -0.06
Pfdn2O70591 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pfdn2O70591 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Pfdn2O70591 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pfdn2O70591 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.65□□□□□ -0.06
Pfdn2O70591 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pfdn2O70591 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pfdn2O70591 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pfdn2O70591 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pfdn2O70591 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Pfdn2O70591 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Pfdn2O70591 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Pfdn2O70591 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pfdn2O70591 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pfdn2O70591 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pfdn2O70591 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pfdn2O70591 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pfdn2O70591 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pfdn2O70591 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Pfdn2O70591 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pfdn2O70591 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pfdn2O70591 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pfdn2O70591 Gm7856-201ENSMUST00000117514 1493 ntBASIC14.64□□□□□ -0.07
Pfdn2O70591 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pfdn2O70591 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pfdn2O70591 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pfdn2O70591 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pfdn2O70591 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pfdn2O70591 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC14.64□□□□□ -0.07
Pfdn2O70591 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pfdn2O70591 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Pfdn2O70591 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC14.64□□□□□ -0.07
Pfdn2O70591 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Pfdn2O70591 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Pfdn2O70591 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pfdn2O70591 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pfdn2O70591 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pfdn2O70591 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pfdn2O70591 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pfdn2O70591 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pfdn2O70591 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pfdn2O70591 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pfdn2O70591 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pfdn2O70591 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Pfdn2O70591 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms