Protein–RNA interactions for Protein: O13535

TY1B-H, Transposon Ty1-H Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-HO13535 POP6YGR030C 477 nt0.59□□□□□ -2.32
TY1B-HO13535 GOS1YHL031C 672 nt0.59□□□□□ -2.32
TY1B-HO13535 YJL156W-AYJL156W-A 222 nt0.59□□□□□ -2.32
TY1B-HO13535 YLR031WYLR031W 561 nt0.59□□□□□ -2.32
TY1B-HO13535 FYV6YNL133C 522 nt0.59□□□□□ -2.32
TY1B-HO13535 IES5YER092W 378 nt0.58□□□□□ -2.32
TY1B-HO13535 RRP15YPR143W 753 nt0.58□□□□□ -2.32
TY1B-HO13535 PRP39YML046W 1890 nt0.58□□□□□ -2.32
TY1B-HO13535 MUD2YKL074C 1584 nt0.58□□□□□ -2.32
TY1B-HO13535 SLU7YDR088C 1149 nt0.57□□□□□ -2.32
TY1B-HO13535 PFS1YHR185C 714 nt0.57□□□□□ -2.32
TY1B-HO13535 TIF11YMR260C 462 nt0.57□□□□□ -2.32
TY1B-HO13535 RAD6YGL058W 519 nt0.57□□□□□ -2.32
TY1B-HO13535 HSK3YKL138C-A 210 nt0.57□□□□□ -2.32
TY1B-HO13535 YOL118CYOL118C 309 nt0.57□□□□□ -2.32
TY1B-HO13535 IRC14YOR135C 342 nt0.57□□□□□ -2.32
TY1B-HO13535 RFA3YJL173C 369 nt0.56□□□□□ -2.32
TY1B-HO13535 GRX8YLR364W 330 nt0.56□□□□□ -2.32
TY1B-HO13535 RPS16AYMR143W 432 nt0.56□□□□□ -2.32
TY1B-HO13535 YOR020W-AYOR020W-A 273 nt0.56□□□□□ -2.32
TY1B-HO13535 COF1YLL050C 432 nt0.55□□□□□ -2.32
TY1B-HO13535 GPX2YBR244W 489 nt0.55□□□□□ -2.32
TY1B-HO13535 NGG1YDR176W 2109 nt0.54□□□□□ -2.32
TY1B-HO13535 YFL012W-AYFL012W-A 375 nt0.54□□□□□ -2.32
TY1B-HO13535 YGL258W-AYGL258W-A 234 nt0.54□□□□□ -2.32
TY1B-HO13535 LAG1YHL003C 1236 nt0.54□□□□□ -2.32
TY1B-HO13535 IST3YIR005W 447 nt0.54□□□□□ -2.32
TY1B-HO13535 snR34snR34 203 nt0.54□□□□□ -2.32
TY1B-HO13535 ERV15YBR210W 429 nt0.54□□□□□ -2.32
TY1B-HO13535 RPL40BYKR094C 387 nt0.53□□□□□ -2.32
TY1B-HO13535 YNL179CYNL179C 438 nt0.53□□□□□ -2.32
TY1B-HO13535 YOR394C-AYOR394C-A 168 nt0.53□□□□□ -2.32
TY1B-HO13535 SLX4YLR135W 2247 nt0.53□□□□□ -2.33
TY1B-HO13535 CSE1YGL238W 2883 nt0.53□□□□□ -2.33
TY1B-HO13535 MEI4YER044C-A 1227 nt0.52□□□□□ -2.33
TY1B-HO13535 SMD2YLR275W 333 nt0.52□□□□□ -2.33
TY1B-HO13535 YNL226WYNL226W 411 nt0.52□□□□□ -2.33
TY1B-HO13535 YOR376WYOR376W 369 nt0.52□□□□□ -2.33
TY1B-HO13535 YPR159C-AYPR159C-A 102 nt0.52□□□□□ -2.33
TY1B-HO13535 YCR024C-BYCR024C-B 267 nt0.52□□□□□ -2.33
TY1B-HO13535 THG1YGR024C 714 nt0.52□□□□□ -2.33
TY1B-HO13535 HOT13YKL084W 351 nt0.52□□□□□ -2.33
TY1B-HO13535 GSP1YLR293C 660 nt0.52□□□□□ -2.33
TY1B-HO13535 RPL38YLR325C 237 nt0.52□□□□□ -2.33
TY1B-HO13535 BLS1YLR408C 369 nt0.52□□□□□ -2.33
TY1B-HO13535 MYO1YHR023W 5787 nt0.51□□□□□ -2.33
TY1B-HO13535 NUP188YML103C 4968 nt0.51□□□□□ -2.33
TY1B-HO13535 YLL007CYLL007C 1998 nt0.51□□□□□ -2.33
TY1B-HO13535 YCR043CYCR043C 384 nt0.51□□□□□ -2.33
TY1B-HO13535 YOL024WYOL024W 519 nt0.51□□□□□ -2.33
TY1B-HO13535 YBR063CYBR063C 1215 nt0.51□□□□□ -2.33
TY1B-HO13535 YCR016WYCR016W 873 nt0.5□□□□□ -2.33
TY1B-HO13535 MMS21YEL019C 804 nt0.5□□□□□ -2.33
TY1B-HO13535 CGI121YML036W 546 nt0.5□□□□□ -2.33
TY1B-HO13535 IZH4YOL101C 939 nt0.5□□□□□ -2.33
TY1B-HO13535 OSH6YKR003W 1347 nt0.5□□□□□ -2.33
TY1B-HO13535 NDD1YOR372C 1665 nt0.5□□□□□ -2.33
TY1B-HO13535 YJL086CYJL086C 369 nt0.5□□□□□ -2.33
TY1B-HO13535 RPC25YKL144C 639 nt0.5□□□□□ -2.33
TY1B-HO13535 YDR261W-AYDR261W-A 1317 nt0.49□□□□□ -2.33
TY1B-HO13535 SGO1YOR073W 1773 nt0.49□□□□□ -2.33
TY1B-HO13535 WAR1YML076C 2835 nt0.49□□□□□ -2.33
TY1B-HO13535 RSM28YDR494W 1086 nt0.49□□□□□ -2.33
TY1B-HO13535 HHT1YBR010W 411 nt0.49□□□□□ -2.33
TY1B-HO13535 snR24snR24 89 nt0.49□□□□□ -2.33
TY1B-HO13535 AIM9YER080W 1884 nt0.48□□□□□ -2.33
TY1B-HO13535 BRX1YOL077C 876 nt0.48□□□□□ -2.33
TY1B-HO13535 STB6YKL072W 2301 nt0.48□□□□□ -2.33
TY1B-HO13535 SLS1YLR139C 1932 nt0.48□□□□□ -2.33
TY1B-HO13535 YDL009CYDL009C 324 nt0.47□□□□□ -2.33
TY1B-HO13535 EMC5YIL027C 426 nt0.47□□□□□ -2.33
TY1B-HO13535 YAL064WYAL064W 285 nt0.47□□□□□ -2.33
TY1B-HO13535 ATP18YML081C-A 180 nt0.47□□□□□ -2.33
TY1B-HO13535 SWS2YNL081C 432 nt0.47□□□□□ -2.33
TY1B-HO13535 YML002WYML002W 2214 nt0.47□□□□□ -2.33
TY1B-HO13535 PEP3YLR148W 2757 nt0.47□□□□□ -2.33
TY1B-HO13535 SMB1YER029C 591 nt0.47□□□□□ -2.33
TY1B-HO13535 YGL109WYGL109W 324 nt0.47□□□□□ -2.33
TY1B-HO13535 ABM1YJR108W 372 nt0.47□□□□□ -2.33
TY1B-HO13535 YDR199WYDR199W 366 nt0.46□□□□□ -2.34
TY1B-HO13535 MZM1YDR493W 372 nt0.46□□□□□ -2.34
TY1B-HO13535 MIC19YFR011C 513 nt0.46□□□□□ -2.34
TY1B-HO13535 YGL217CYGL217C 342 nt0.45□□□□□ -2.34
TY1B-HO13535 BET4YJL031C 984 nt0.45□□□□□ -2.34
TY1B-HO13535 RPL9BYNL067W 576 nt0.45□□□□□ -2.34
TY1B-HO13535 PGA1YNL158W 597 nt0.45□□□□□ -2.34
TY1B-HO13535 UFE1YOR075W 1041 nt0.45□□□□□ -2.34
TY1B-HO13535 PET20YPL159C 762 nt0.45□□□□□ -2.34
TY1B-HO13535 SWT1YOR166C 1377 nt0.45□□□□□ -2.34
TY1B-HO13535 YGR045CYGR045C 363 nt0.45□□□□□ -2.34
TY1B-HO13535 YPL034WYPL034W 498 nt0.45□□□□□ -2.34
TY1B-HO13535 GEP7YGL057C 864 nt0.44□□□□□ -2.34
TY1B-HO13535 RCN1YKL159C 636 nt0.44□□□□□ -2.34
TY1B-HO13535 YBR200W-AYBR200W-A 165 nt0.44□□□□□ -2.34
TY1B-HO13535 NOT5YPR072W 1683 nt0.43□□□□□ -2.34
TY1B-HO13535 CHZ1YER030W 462 nt0.43□□□□□ -2.34
TY1B-HO13535 YHL002C-AYHL002C-A 489 nt0.43□□□□□ -2.34
TY1B-HO13535 COX8YLR395C 237 nt0.43□□□□□ -2.34
TY1B-HO13535 SWM2YNR004W 441 nt0.43□□□□□ -2.34
TY1B-HO13535 VMA7YGR020C 357 nt0.42□□□□□ -2.34
Retrieved 100 of 7,029 protein–RNA pairs in 15.7 ms