Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RCCD1A6NED2 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RCCD1A6NED2 DUX4L2-201ENST00000561772 1275 ntBASIC21.57■■□□□ 1.04
RCCD1A6NED2 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.57■■□□□ 1.04
RCCD1A6NED2 AC120498.10-201ENST00000621827 505 ntBASIC21.57■■□□□ 1.04
RCCD1A6NED2 DUX4L6-201ENST00000626483 1275 ntBASIC21.57■■□□□ 1.04
RCCD1A6NED2 DUX4L1-201ENST00000627662 1275 ntBASIC21.57■■□□□ 1.04
RCCD1A6NED2 DUX4L8-201ENST00000629013 1275 ntBASIC21.57■■□□□ 1.04
RCCD1A6NED2 DUX4L3-201ENST00000630187 1275 ntBASIC21.57■■□□□ 1.04
RCCD1A6NED2 DUX4L7-201ENST00000630678 1275 ntBASIC21.57■■□□□ 1.04
RCCD1A6NED2 DUX4L5-201ENST00000630834 1275 ntBASIC21.57■■□□□ 1.04
RCCD1A6NED2 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RCCD1A6NED2 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
RCCD1A6NED2 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.57■■□□□ 1.04
RCCD1A6NED2 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC21.57■■□□□ 1.04
RCCD1A6NED2 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
RCCD1A6NED2 BX119927.1-201ENST00000636596 1552 ntBASIC21.57■■□□□ 1.04
RCCD1A6NED2 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21.56■■□□□ 1.04
RCCD1A6NED2 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RCCD1A6NED2 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RCCD1A6NED2 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
RCCD1A6NED2 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RCCD1A6NED2 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.56■■□□□ 1.04
RCCD1A6NED2 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RCCD1A6NED2 AC027612.3-201ENST00000413684 1047 ntBASIC21.56■■□□□ 1.04
RCCD1A6NED2 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
RCCD1A6NED2 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.56■■□□□ 1.04
RCCD1A6NED2 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
RCCD1A6NED2 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.55■■□□□ 1.04
RCCD1A6NED2 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RCCD1A6NED2 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.55■■□□□ 1.04
RCCD1A6NED2 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RCCD1A6NED2 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.55■■□□□ 1.04
RCCD1A6NED2 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RCCD1A6NED2 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
RCCD1A6NED2 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.55■■□□□ 1.04
RCCD1A6NED2 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RCCD1A6NED2 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RCCD1A6NED2 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
RCCD1A6NED2 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RCCD1A6NED2 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RCCD1A6NED2 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RCCD1A6NED2 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
RCCD1A6NED2 RBM17P2-201ENST00000616397 1405 ntBASIC21.55■■□□□ 1.04
RCCD1A6NED2 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RCCD1A6NED2 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RCCD1A6NED2 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RCCD1A6NED2 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
RCCD1A6NED2 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
RCCD1A6NED2 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
RCCD1A6NED2 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RCCD1A6NED2 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
RCCD1A6NED2 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RCCD1A6NED2 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.54■■□□□ 1.04
RCCD1A6NED2 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RCCD1A6NED2 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.54■■□□□ 1.04
RCCD1A6NED2 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
RCCD1A6NED2 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RCCD1A6NED2 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
RCCD1A6NED2 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RCCD1A6NED2 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.54■■□□□ 1.04
RCCD1A6NED2 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC21.53■■□□□ 1.04
RCCD1A6NED2 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC21.53■■□□□ 1.04
RCCD1A6NED2 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RCCD1A6NED2 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC21.53■■□□□ 1.04
RCCD1A6NED2 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RCCD1A6NED2 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RCCD1A6NED2 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RCCD1A6NED2 TMEM179-206ENST00000616017 1645 ntBASIC21.53■■□□□ 1.04
RCCD1A6NED2 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RCCD1A6NED2 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RCCD1A6NED2 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RCCD1A6NED2 TREX1-205ENST00000625293 1783 ntBASIC21.53■■□□□ 1.04
RCCD1A6NED2 AP000974.1-201ENST00000623909 2387 ntBASIC21.53■■□□□ 1.04
RCCD1A6NED2 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
RCCD1A6NED2 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC21.53■■□□□ 1.04
RCCD1A6NED2 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC21.53■■□□□ 1.04
RCCD1A6NED2 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
RCCD1A6NED2 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
RCCD1A6NED2 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
RCCD1A6NED2 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
RCCD1A6NED2 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RCCD1A6NED2 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.52■■□□□ 1.04
RCCD1A6NED2 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RCCD1A6NED2 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.52■■□□□ 1.04
RCCD1A6NED2 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RCCD1A6NED2 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
RCCD1A6NED2 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RCCD1A6NED2 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.52■■□□□ 1.04
RCCD1A6NED2 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.52■■□□□ 1.04
RCCD1A6NED2 AC142381.2-201ENST00000566120 298 ntBASIC21.52■■□□□ 1.04
RCCD1A6NED2 AL139246.5-201ENST00000606645 996 ntBASIC21.52■■□□□ 1.04
RCCD1A6NED2 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.52■■□□□ 1.04
RCCD1A6NED2 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC21.52■■□□□ 1.04
RCCD1A6NED2 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
RCCD1A6NED2 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RCCD1A6NED2 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RCCD1A6NED2 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
RCCD1A6NED2 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.03
RCCD1A6NED2 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.52■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms