Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHGC4Q9Y5F7 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHGC4Q9Y5F7 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.52■□□□□ 0.88
PCDHGC4Q9Y5F7 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHGC4Q9Y5F7 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
PCDHGC4Q9Y5F7 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.52■□□□□ 0.88
PCDHGC4Q9Y5F7 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.52■□□□□ 0.88
PCDHGC4Q9Y5F7 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.52■□□□□ 0.88
PCDHGC4Q9Y5F7 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHGC4Q9Y5F7 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
PCDHGC4Q9Y5F7 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.52■□□□□ 0.87
PCDHGC4Q9Y5F7 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGC4Q9Y5F7 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGC4Q9Y5F7 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGC4Q9Y5F7 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
PCDHGC4Q9Y5F7 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGC4Q9Y5F7 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.51■□□□□ 0.87
PCDHGC4Q9Y5F7 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGC4Q9Y5F7 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.51■□□□□ 0.87
PCDHGC4Q9Y5F7 AC073210.2-201ENST00000430369 194 ntBASIC20.51■□□□□ 0.87
PCDHGC4Q9Y5F7 AC091874.3-201ENST00000512672 1195 ntBASIC20.51■□□□□ 0.87
PCDHGC4Q9Y5F7 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.51■□□□□ 0.87
PCDHGC4Q9Y5F7 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
PCDHGC4Q9Y5F7 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGC4Q9Y5F7 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGC4Q9Y5F7 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.51■□□□□ 0.87
PCDHGC4Q9Y5F7 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGC4Q9Y5F7 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGC4Q9Y5F7 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.5■□□□□ 0.87
PCDHGC4Q9Y5F7 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
PCDHGC4Q9Y5F7 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGC4Q9Y5F7 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGC4Q9Y5F7 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGC4Q9Y5F7 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGC4Q9Y5F7 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGC4Q9Y5F7 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGC4Q9Y5F7 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.5■□□□□ 0.87
PCDHGC4Q9Y5F7 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.5■□□□□ 0.87
PCDHGC4Q9Y5F7 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.5■□□□□ 0.87
PCDHGC4Q9Y5F7 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.5■□□□□ 0.87
PCDHGC4Q9Y5F7 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGC4Q9Y5F7 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGC4Q9Y5F7 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGC4Q9Y5F7 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGC4Q9Y5F7 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGC4Q9Y5F7 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.5■□□□□ 0.87
PCDHGC4Q9Y5F7 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
PCDHGC4Q9Y5F7 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGC4Q9Y5F7 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGC4Q9Y5F7 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGC4Q9Y5F7 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGC4Q9Y5F7 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGC4Q9Y5F7 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
PCDHGC4Q9Y5F7 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.49■□□□□ 0.87
PCDHGC4Q9Y5F7 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.49■□□□□ 0.87
PCDHGC4Q9Y5F7 AC097658.1-201ENST00000475555 843 ntBASIC20.49■□□□□ 0.87
PCDHGC4Q9Y5F7 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.49■□□□□ 0.87
PCDHGC4Q9Y5F7 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.49■□□□□ 0.87
PCDHGC4Q9Y5F7 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.49■□□□□ 0.87
PCDHGC4Q9Y5F7 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.49■□□□□ 0.87
PCDHGC4Q9Y5F7 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
PCDHGC4Q9Y5F7 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.49■□□□□ 0.87
PCDHGC4Q9Y5F7 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.49■□□□□ 0.87
PCDHGC4Q9Y5F7 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.49■□□□□ 0.87
PCDHGC4Q9Y5F7 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGC4Q9Y5F7 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.49■□□□□ 0.87
PCDHGC4Q9Y5F7 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGC4Q9Y5F7 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGC4Q9Y5F7 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGC4Q9Y5F7 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGC4Q9Y5F7 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGC4Q9Y5F7 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGC4Q9Y5F7 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
PCDHGC4Q9Y5F7 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
PCDHGC4Q9Y5F7 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.48■□□□□ 0.87
PCDHGC4Q9Y5F7 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
PCDHGC4Q9Y5F7 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.48■□□□□ 0.87
PCDHGC4Q9Y5F7 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGC4Q9Y5F7 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGC4Q9Y5F7 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.48■□□□□ 0.87
PCDHGC4Q9Y5F7 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGC4Q9Y5F7 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGC4Q9Y5F7 AL157384.1-201ENST00000445995 2473 ntBASIC20.48■□□□□ 0.87
PCDHGC4Q9Y5F7 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.48■□□□□ 0.87
PCDHGC4Q9Y5F7 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGC4Q9Y5F7 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGC4Q9Y5F7 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.47■□□□□ 0.87
PCDHGC4Q9Y5F7 AC073314.1-201ENST00000568729 2216 ntBASIC20.47■□□□□ 0.87
PCDHGC4Q9Y5F7 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGC4Q9Y5F7 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.47■□□□□ 0.87
PCDHGC4Q9Y5F7 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.47■□□□□ 0.87
PCDHGC4Q9Y5F7 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
PCDHGC4Q9Y5F7 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGC4Q9Y5F7 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
PCDHGC4Q9Y5F7 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGC4Q9Y5F7 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.47■□□□□ 0.87
PCDHGC4Q9Y5F7 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGC4Q9Y5F7 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGC4Q9Y5F7 C2orf69P4-201ENST00000565394 541 ntBASIC20.47■□□□□ 0.87
PCDHGC4Q9Y5F7 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms