Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEUROD4Q9HD90 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.16■□□□□ 0.66
NEUROD4Q9HD90 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.16■□□□□ 0.66
NEUROD4Q9HD90 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEUROD4Q9HD90 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
NEUROD4Q9HD90 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NEUROD4Q9HD90 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NEUROD4Q9HD90 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
NEUROD4Q9HD90 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NEUROD4Q9HD90 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NEUROD4Q9HD90 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.15■□□□□ 0.66
NEUROD4Q9HD90 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NEUROD4Q9HD90 PGM5P4-201ENST00000421970 445 ntBASIC19.15■□□□□ 0.66
NEUROD4Q9HD90 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.15■□□□□ 0.66
NEUROD4Q9HD90 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
NEUROD4Q9HD90 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.15■□□□□ 0.66
NEUROD4Q9HD90 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.15■□□□□ 0.66
NEUROD4Q9HD90 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
NEUROD4Q9HD90 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.15■□□□□ 0.66
NEUROD4Q9HD90 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
NEUROD4Q9HD90 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.15■□□□□ 0.66
NEUROD4Q9HD90 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.15■□□□□ 0.66
NEUROD4Q9HD90 KRT8P36-201ENST00000489121 1440 ntBASIC19.15■□□□□ 0.66
NEUROD4Q9HD90 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.15■□□□□ 0.66
NEUROD4Q9HD90 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NEUROD4Q9HD90 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.15■□□□□ 0.66
NEUROD4Q9HD90 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
NEUROD4Q9HD90 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.14■□□□□ 0.66
NEUROD4Q9HD90 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
NEUROD4Q9HD90 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NEUROD4Q9HD90 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.14■□□□□ 0.65
NEUROD4Q9HD90 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.14■□□□□ 0.65
NEUROD4Q9HD90 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NEUROD4Q9HD90 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
NEUROD4Q9HD90 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
NEUROD4Q9HD90 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.14■□□□□ 0.65
NEUROD4Q9HD90 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.14■□□□□ 0.65
NEUROD4Q9HD90 AC010536.3-201ENST00000620306 533 ntBASIC19.14■□□□□ 0.65
NEUROD4Q9HD90 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NEUROD4Q9HD90 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.14■□□□□ 0.65
NEUROD4Q9HD90 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
NEUROD4Q9HD90 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.13■□□□□ 0.65
NEUROD4Q9HD90 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NEUROD4Q9HD90 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.13■□□□□ 0.65
NEUROD4Q9HD90 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NEUROD4Q9HD90 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
NEUROD4Q9HD90 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NEUROD4Q9HD90 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
NEUROD4Q9HD90 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.13■□□□□ 0.65
NEUROD4Q9HD90 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
NEUROD4Q9HD90 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.13■□□□□ 0.65
NEUROD4Q9HD90 TERF1P5-201ENST00000477545 1207 ntBASIC19.13■□□□□ 0.65
NEUROD4Q9HD90 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.13■□□□□ 0.65
NEUROD4Q9HD90 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.13■□□□□ 0.65
NEUROD4Q9HD90 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.13■□□□□ 0.65
NEUROD4Q9HD90 AL162412.1-201ENST00000567129 965 ntBASIC19.13■□□□□ 0.65
NEUROD4Q9HD90 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.13■□□□□ 0.65
NEUROD4Q9HD90 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.13■□□□□ 0.65
NEUROD4Q9HD90 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.13■□□□□ 0.65
NEUROD4Q9HD90 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
NEUROD4Q9HD90 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
NEUROD4Q9HD90 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.13■□□□□ 0.65
NEUROD4Q9HD90 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.13■□□□□ 0.65
NEUROD4Q9HD90 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NEUROD4Q9HD90 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
NEUROD4Q9HD90 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NEUROD4Q9HD90 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.13■□□□□ 0.65
NEUROD4Q9HD90 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
NEUROD4Q9HD90 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NEUROD4Q9HD90 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NEUROD4Q9HD90 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
NEUROD4Q9HD90 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
NEUROD4Q9HD90 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.12■□□□□ 0.65
NEUROD4Q9HD90 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NEUROD4Q9HD90 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.12■□□□□ 0.65
NEUROD4Q9HD90 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NEUROD4Q9HD90 AC007322.4-201ENST00000509611 723 ntBASIC19.12■□□□□ 0.65
NEUROD4Q9HD90 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.12■□□□□ 0.65
NEUROD4Q9HD90 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
NEUROD4Q9HD90 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
NEUROD4Q9HD90 AL591742.1-201ENST00000604433 565 ntBASIC19.12■□□□□ 0.65
NEUROD4Q9HD90 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NEUROD4Q9HD90 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NEUROD4Q9HD90 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NEUROD4Q9HD90 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NEUROD4Q9HD90 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NEUROD4Q9HD90 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
NEUROD4Q9HD90 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NEUROD4Q9HD90 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NEUROD4Q9HD90 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NEUROD4Q9HD90 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
NEUROD4Q9HD90 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NEUROD4Q9HD90 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.11■□□□□ 0.65
NEUROD4Q9HD90 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NEUROD4Q9HD90 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.11■□□□□ 0.65
NEUROD4Q9HD90 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.11■□□□□ 0.65
NEUROD4Q9HD90 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NEUROD4Q9HD90 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NEUROD4Q9HD90 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.11■□□□□ 0.65
NEUROD4Q9HD90 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms