Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ska1Q9CPV1 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ska1Q9CPV1 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ska1Q9CPV1 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ska1Q9CPV1 Gm42642-201ENSMUST00000200683 355 ntBASIC16.64■□□□□ 0.25
Ska1Q9CPV1 Gm10033-202ENSMUST00000211874 928 ntBASIC16.64■□□□□ 0.25
Ska1Q9CPV1 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ska1Q9CPV1 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.64■□□□□ 0.25
Ska1Q9CPV1 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ska1Q9CPV1 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Ska1Q9CPV1 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ska1Q9CPV1 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ska1Q9CPV1 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ska1Q9CPV1 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ska1Q9CPV1 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ska1Q9CPV1 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Ska1Q9CPV1 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.63■□□□□ 0.25
Ska1Q9CPV1 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.63■□□□□ 0.25
Ska1Q9CPV1 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ska1Q9CPV1 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ska1Q9CPV1 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ska1Q9CPV1 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ska1Q9CPV1 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.63■□□□□ 0.25
Ska1Q9CPV1 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.63■□□□□ 0.25
Ska1Q9CPV1 Gm7514-201ENSMUST00000209475 934 ntBASIC16.63■□□□□ 0.25
Ska1Q9CPV1 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.63■□□□□ 0.25
Ska1Q9CPV1 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ska1Q9CPV1 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.63■□□□□ 0.25
Ska1Q9CPV1 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ska1Q9CPV1 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ska1Q9CPV1 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ska1Q9CPV1 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ska1Q9CPV1 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ska1Q9CPV1 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ska1Q9CPV1 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ska1Q9CPV1 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ska1Q9CPV1 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
Ska1Q9CPV1 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.62■□□□□ 0.25
Ska1Q9CPV1 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ska1Q9CPV1 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.62■□□□□ 0.25
Ska1Q9CPV1 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ska1Q9CPV1 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Ska1Q9CPV1 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ska1Q9CPV1 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ska1Q9CPV1 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ska1Q9CPV1 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ska1Q9CPV1 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ska1Q9CPV1 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ska1Q9CPV1 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ska1Q9CPV1 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ska1Q9CPV1 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ska1Q9CPV1 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ska1Q9CPV1 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ska1Q9CPV1 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ska1Q9CPV1 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.61■□□□□ 0.25
Ska1Q9CPV1 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Ska1Q9CPV1 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ska1Q9CPV1 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ska1Q9CPV1 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Ska1Q9CPV1 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
Ska1Q9CPV1 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ska1Q9CPV1 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ska1Q9CPV1 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ska1Q9CPV1 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ska1Q9CPV1 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Ska1Q9CPV1 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Ska1Q9CPV1 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ska1Q9CPV1 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ska1Q9CPV1 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.61■□□□□ 0.25
Ska1Q9CPV1 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Ska1Q9CPV1 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ska1Q9CPV1 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ska1Q9CPV1 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ska1Q9CPV1 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ska1Q9CPV1 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Ska1Q9CPV1 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ska1Q9CPV1 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ska1Q9CPV1 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
Ska1Q9CPV1 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ska1Q9CPV1 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ska1Q9CPV1 Gm6420-201ENSMUST00000193885 723 ntBASIC16.6■□□□□ 0.25
Ska1Q9CPV1 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.6■□□□□ 0.25
Ska1Q9CPV1 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ska1Q9CPV1 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Ska1Q9CPV1 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Ska1Q9CPV1 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.6■□□□□ 0.25
Ska1Q9CPV1 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
Ska1Q9CPV1 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ska1Q9CPV1 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ska1Q9CPV1 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ska1Q9CPV1 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ska1Q9CPV1 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ska1Q9CPV1 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Ska1Q9CPV1 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ska1Q9CPV1 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ska1Q9CPV1 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
Ska1Q9CPV1 Nespas-201ENSMUST00000143738 1083 ntBASIC16.59■□□□□ 0.25
Ska1Q9CPV1 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.59■□□□□ 0.25
Ska1Q9CPV1 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ska1Q9CPV1 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms