Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLHC1Q8NHS4 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.47■□□□□ 0.71
CLHC1Q8NHS4 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLHC1Q8NHS4 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLHC1Q8NHS4 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.47■□□□□ 0.71
CLHC1Q8NHS4 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.47■□□□□ 0.71
CLHC1Q8NHS4 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLHC1Q8NHS4 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
CLHC1Q8NHS4 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.46■□□□□ 0.71
CLHC1Q8NHS4 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLHC1Q8NHS4 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CLHC1Q8NHS4 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLHC1Q8NHS4 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLHC1Q8NHS4 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLHC1Q8NHS4 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
CLHC1Q8NHS4 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLHC1Q8NHS4 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLHC1Q8NHS4 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.46■□□□□ 0.71
CLHC1Q8NHS4 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLHC1Q8NHS4 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLHC1Q8NHS4 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.46■□□□□ 0.71
CLHC1Q8NHS4 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.46■□□□□ 0.71
CLHC1Q8NHS4 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLHC1Q8NHS4 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLHC1Q8NHS4 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLHC1Q8NHS4 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLHC1Q8NHS4 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.46■□□□□ 0.71
CLHC1Q8NHS4 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.46■□□□□ 0.71
CLHC1Q8NHS4 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLHC1Q8NHS4 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CLHC1Q8NHS4 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.46■□□□□ 0.71
CLHC1Q8NHS4 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.46■□□□□ 0.71
CLHC1Q8NHS4 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLHC1Q8NHS4 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.45■□□□□ 0.7
CLHC1Q8NHS4 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.45■□□□□ 0.7
CLHC1Q8NHS4 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLHC1Q8NHS4 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLHC1Q8NHS4 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CLHC1Q8NHS4 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLHC1Q8NHS4 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CLHC1Q8NHS4 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.45■□□□□ 0.7
CLHC1Q8NHS4 UBE2DNL-204ENST00000602536 740 ntBASIC19.45■□□□□ 0.7
CLHC1Q8NHS4 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.45■□□□□ 0.7
CLHC1Q8NHS4 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CLHC1Q8NHS4 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLHC1Q8NHS4 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CLHC1Q8NHS4 AC019069.1-201ENST00000610008 1333 ntBASIC19.45■□□□□ 0.7
CLHC1Q8NHS4 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CLHC1Q8NHS4 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLHC1Q8NHS4 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLHC1Q8NHS4 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.44■□□□□ 0.7
CLHC1Q8NHS4 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLHC1Q8NHS4 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.44■□□□□ 0.7
CLHC1Q8NHS4 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.44■□□□□ 0.7
CLHC1Q8NHS4 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.44■□□□□ 0.7
CLHC1Q8NHS4 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.44■□□□□ 0.7
CLHC1Q8NHS4 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLHC1Q8NHS4 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLHC1Q8NHS4 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CLHC1Q8NHS4 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.44■□□□□ 0.7
CLHC1Q8NHS4 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CLHC1Q8NHS4 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.44■□□□□ 0.7
CLHC1Q8NHS4 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CLHC1Q8NHS4 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLHC1Q8NHS4 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLHC1Q8NHS4 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.44■□□□□ 0.7
CLHC1Q8NHS4 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CLHC1Q8NHS4 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CLHC1Q8NHS4 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.43■□□□□ 0.7
CLHC1Q8NHS4 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CLHC1Q8NHS4 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.43■□□□□ 0.7
CLHC1Q8NHS4 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CLHC1Q8NHS4 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLHC1Q8NHS4 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLHC1Q8NHS4 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLHC1Q8NHS4 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLHC1Q8NHS4 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLHC1Q8NHS4 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
CLHC1Q8NHS4 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLHC1Q8NHS4 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.43■□□□□ 0.7
CLHC1Q8NHS4 AC007322.3-201ENST00000426526 701 ntBASIC19.43■□□□□ 0.7
CLHC1Q8NHS4 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.43■□□□□ 0.7
CLHC1Q8NHS4 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CLHC1Q8NHS4 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLHC1Q8NHS4 RNF165-205ENST00000588679 2904 ntBASIC19.43■□□□□ 0.7
CLHC1Q8NHS4 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLHC1Q8NHS4 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLHC1Q8NHS4 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.43■□□□□ 0.7
CLHC1Q8NHS4 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
CLHC1Q8NHS4 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLHC1Q8NHS4 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CLHC1Q8NHS4 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.42■□□□□ 0.7
CLHC1Q8NHS4 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLHC1Q8NHS4 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLHC1Q8NHS4 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLHC1Q8NHS4 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLHC1Q8NHS4 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLHC1Q8NHS4 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLHC1Q8NHS4 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.42■□□□□ 0.7
CLHC1Q8NHS4 KRT19P1-201ENST00000405746 1186 ntBASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms