Protein–RNA interactions for Protein: Q8NCL8

TMEM116, Transmembrane protein 116, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116Q8NCL8 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM116Q8NCL8 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC16.04■□□□□ 0.16
TMEM116Q8NCL8 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM116Q8NCL8 RAB43-208ENST00000615093 783 ntTSL 5 BASIC16.04■□□□□ 0.16
TMEM116Q8NCL8 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC16.04■□□□□ 0.16
TMEM116Q8NCL8 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
TMEM116Q8NCL8 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM116Q8NCL8 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
TMEM116Q8NCL8 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM116Q8NCL8 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC16.03■□□□□ 0.16
TMEM116Q8NCL8 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM116Q8NCL8 AC116050.2-201ENST00000612102 1779 ntBASIC16.03■□□□□ 0.16
TMEM116Q8NCL8 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM116Q8NCL8 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM116Q8NCL8 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
TMEM116Q8NCL8 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM116Q8NCL8 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM116Q8NCL8 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM116Q8NCL8 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
TMEM116Q8NCL8 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC16.03■□□□□ 0.16
TMEM116Q8NCL8 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC16.03■□□□□ 0.16
TMEM116Q8NCL8 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC16.03■□□□□ 0.16
TMEM116Q8NCL8 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC16.03■□□□□ 0.16
TMEM116Q8NCL8 DUX4L2-201ENST00000561772 1275 ntBASIC16.03■□□□□ 0.16
TMEM116Q8NCL8 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM116Q8NCL8 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC16.03■□□□□ 0.16
TMEM116Q8NCL8 DUX4L6-201ENST00000626483 1275 ntBASIC16.03■□□□□ 0.16
TMEM116Q8NCL8 DUX4L1-201ENST00000627662 1275 ntBASIC16.03■□□□□ 0.16
TMEM116Q8NCL8 DUX4L8-201ENST00000629013 1275 ntBASIC16.03■□□□□ 0.16
TMEM116Q8NCL8 DUX4L3-201ENST00000630187 1275 ntBASIC16.03■□□□□ 0.16
TMEM116Q8NCL8 DUX4L7-201ENST00000630678 1275 ntBASIC16.03■□□□□ 0.16
TMEM116Q8NCL8 DUX4L5-201ENST00000630834 1275 ntBASIC16.03■□□□□ 0.16
TMEM116Q8NCL8 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM116Q8NCL8 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM116Q8NCL8 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TMEM116Q8NCL8 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM116Q8NCL8 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
TMEM116Q8NCL8 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC16.03■□□□□ 0.16
TMEM116Q8NCL8 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM116Q8NCL8 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM116Q8NCL8 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
TMEM116Q8NCL8 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM116Q8NCL8 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM116Q8NCL8 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
TMEM116Q8NCL8 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM116Q8NCL8 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM116Q8NCL8 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM116Q8NCL8 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM116Q8NCL8 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM116Q8NCL8 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM116Q8NCL8 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM116Q8NCL8 NAA20-201ENST00000310450 920 ntTSL 2 BASIC16.02■□□□□ 0.16
TMEM116Q8NCL8 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC16.02■□□□□ 0.16
TMEM116Q8NCL8 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC16.02■□□□□ 0.16
TMEM116Q8NCL8 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC16.02■□□□□ 0.16
TMEM116Q8NCL8 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC16.02■□□□□ 0.16
TMEM116Q8NCL8 KRT18P14-201ENST00000534205 1250 ntBASIC16.02■□□□□ 0.16
TMEM116Q8NCL8 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC16.02■□□□□ 0.16
TMEM116Q8NCL8 CCDC92B-201ENST00000575506 885 ntBASIC16.02■□□□□ 0.16
TMEM116Q8NCL8 TERF1P2-201ENST00000583350 1212 ntBASIC16.02■□□□□ 0.16
TMEM116Q8NCL8 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC16.02■□□□□ 0.16
TMEM116Q8NCL8 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.15
TMEM116Q8NCL8 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC16.02■□□□□ 0.15
TMEM116Q8NCL8 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC16.02■□□□□ 0.15
TMEM116Q8NCL8 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
TMEM116Q8NCL8 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
TMEM116Q8NCL8 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
TMEM116Q8NCL8 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM116Q8NCL8 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM116Q8NCL8 ME2-218ENST00000640965 2476 ntTSL 5 BASIC16.01■□□□□ 0.15
TMEM116Q8NCL8 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC16.01■□□□□ 0.15
TMEM116Q8NCL8 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM116Q8NCL8 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC16.01■□□□□ 0.15
TMEM116Q8NCL8 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM116Q8NCL8 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM116Q8NCL8 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC16.01■□□□□ 0.15
TMEM116Q8NCL8 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM116Q8NCL8 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC16.01■□□□□ 0.15
TMEM116Q8NCL8 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC16.01■□□□□ 0.15
TMEM116Q8NCL8 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM116Q8NCL8 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM116Q8NCL8 AC099778.1-201ENST00000568593 1911 ntBASIC16.01■□□□□ 0.15
TMEM116Q8NCL8 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM116Q8NCL8 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TMEM116Q8NCL8 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM116Q8NCL8 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM116Q8NCL8 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM116Q8NCL8 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM116Q8NCL8 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TMEM116Q8NCL8 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TMEM116Q8NCL8 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TMEM116Q8NCL8 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TMEM116Q8NCL8 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TMEM116Q8NCL8 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TMEM116Q8NCL8 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TMEM116Q8NCL8 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC16■□□□□ 0.15
TMEM116Q8NCL8 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16■□□□□ 0.15
TMEM116Q8NCL8 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TMEM116Q8NCL8 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TMEM116Q8NCL8 AC019069.1-201ENST00000610008 1333 ntBASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms