Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf220Q6PDX6 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Rnf220Q6PDX6 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf220Q6PDX6 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf220Q6PDX6 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf220Q6PDX6 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf220Q6PDX6 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf220Q6PDX6 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf220Q6PDX6 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf220Q6PDX6 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
Rnf220Q6PDX6 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf220Q6PDX6 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.72■□□□□ 0.27
Rnf220Q6PDX6 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf220Q6PDX6 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Rnf220Q6PDX6 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf220Q6PDX6 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf220Q6PDX6 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
Rnf220Q6PDX6 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf220Q6PDX6 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf220Q6PDX6 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Rnf220Q6PDX6 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf220Q6PDX6 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf220Q6PDX6 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf220Q6PDX6 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf220Q6PDX6 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf220Q6PDX6 Smad6-203ENSMUST00000179458 273 ntBASIC16.71■□□□□ 0.27
Rnf220Q6PDX6 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf220Q6PDX6 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf220Q6PDX6 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf220Q6PDX6 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf220Q6PDX6 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf220Q6PDX6 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf220Q6PDX6 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf220Q6PDX6 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Rnf220Q6PDX6 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Rnf220Q6PDX6 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf220Q6PDX6 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf220Q6PDX6 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf220Q6PDX6 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf220Q6PDX6 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf220Q6PDX6 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf220Q6PDX6 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf220Q6PDX6 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf220Q6PDX6 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf220Q6PDX6 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf220Q6PDX6 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf220Q6PDX6 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf220Q6PDX6 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf220Q6PDX6 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf220Q6PDX6 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf220Q6PDX6 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Rnf220Q6PDX6 Gm11421-201ENSMUST00000122124 294 ntBASIC16.7■□□□□ 0.26
Rnf220Q6PDX6 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf220Q6PDX6 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
Rnf220Q6PDX6 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf220Q6PDX6 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf220Q6PDX6 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf220Q6PDX6 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf220Q6PDX6 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf220Q6PDX6 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Rnf220Q6PDX6 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf220Q6PDX6 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf220Q6PDX6 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf220Q6PDX6 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.7■□□□□ 0.26
Rnf220Q6PDX6 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf220Q6PDX6 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf220Q6PDX6 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf220Q6PDX6 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf220Q6PDX6 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.69■□□□□ 0.26
Rnf220Q6PDX6 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf220Q6PDX6 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf220Q6PDX6 Gm43034-201ENSMUST00000198678 1364 ntBASIC16.69■□□□□ 0.26
Rnf220Q6PDX6 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf220Q6PDX6 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf220Q6PDX6 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf220Q6PDX6 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf220Q6PDX6 Wdr70-203ENSMUST00000227371 1130 ntBASIC16.69■□□□□ 0.26
Rnf220Q6PDX6 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.69■□□□□ 0.26
Rnf220Q6PDX6 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf220Q6PDX6 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf220Q6PDX6 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf220Q6PDX6 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.69■□□□□ 0.26
Rnf220Q6PDX6 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf220Q6PDX6 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf220Q6PDX6 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf220Q6PDX6 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Rnf220Q6PDX6 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf220Q6PDX6 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf220Q6PDX6 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Rnf220Q6PDX6 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf220Q6PDX6 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf220Q6PDX6 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf220Q6PDX6 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf220Q6PDX6 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC16.68■□□□□ 0.26
Rnf220Q6PDX6 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Rnf220Q6PDX6 Mir7075-201ENSMUST00000184187 82 ntBASIC16.68■□□□□ 0.26
Rnf220Q6PDX6 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf220Q6PDX6 Gm43173-201ENSMUST00000202246 593 ntBASIC16.68■□□□□ 0.26
Rnf220Q6PDX6 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC16.68■□□□□ 0.26
Rnf220Q6PDX6 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms