Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.47■□□□□ 0.55
NIPAL3Q6P499 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NIPAL3Q6P499 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.47■□□□□ 0.55
NIPAL3Q6P499 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.47■□□□□ 0.55
NIPAL3Q6P499 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NIPAL3Q6P499 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NIPAL3Q6P499 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NIPAL3Q6P499 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.47■□□□□ 0.55
NIPAL3Q6P499 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NIPAL3Q6P499 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
NIPAL3Q6P499 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.46■□□□□ 0.55
NIPAL3Q6P499 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.46■□□□□ 0.55
NIPAL3Q6P499 AC006015.1-201ENST00000429970 570 ntBASIC18.46■□□□□ 0.55
NIPAL3Q6P499 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.46■□□□□ 0.55
NIPAL3Q6P499 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.46■□□□□ 0.55
NIPAL3Q6P499 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
NIPAL3Q6P499 IKBKGP1-201ENST00000612193 1073 ntBASIC18.46■□□□□ 0.55
NIPAL3Q6P499 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.46■□□□□ 0.55
NIPAL3Q6P499 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
NIPAL3Q6P499 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
NIPAL3Q6P499 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.46■□□□□ 0.55
NIPAL3Q6P499 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NIPAL3Q6P499 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.46■□□□□ 0.55
NIPAL3Q6P499 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NIPAL3Q6P499 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.54
NIPAL3Q6P499 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
NIPAL3Q6P499 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.54
NIPAL3Q6P499 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.46■□□□□ 0.54
NIPAL3Q6P499 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NIPAL3Q6P499 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
NIPAL3Q6P499 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
NIPAL3Q6P499 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
NIPAL3Q6P499 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NIPAL3Q6P499 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
NIPAL3Q6P499 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
NIPAL3Q6P499 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
NIPAL3Q6P499 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
NIPAL3Q6P499 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
NIPAL3Q6P499 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.45■□□□□ 0.54
NIPAL3Q6P499 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.45■□□□□ 0.54
NIPAL3Q6P499 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.45■□□□□ 0.54
NIPAL3Q6P499 RARRES2P11-201ENST00000635158 484 ntBASIC18.45■□□□□ 0.54
NIPAL3Q6P499 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NIPAL3Q6P499 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NIPAL3Q6P499 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
NIPAL3Q6P499 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NIPAL3Q6P499 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.45■□□□□ 0.54
NIPAL3Q6P499 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NIPAL3Q6P499 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NIPAL3Q6P499 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.45■□□□□ 0.54
NIPAL3Q6P499 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.45■□□□□ 0.54
NIPAL3Q6P499 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.44■□□□□ 0.54
NIPAL3Q6P499 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NIPAL3Q6P499 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.44■□□□□ 0.54
NIPAL3Q6P499 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
NIPAL3Q6P499 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
NIPAL3Q6P499 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NIPAL3Q6P499 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NIPAL3Q6P499 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NIPAL3Q6P499 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NIPAL3Q6P499 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NIPAL3Q6P499 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
NIPAL3Q6P499 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.44■□□□□ 0.54
NIPAL3Q6P499 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
NIPAL3Q6P499 BID-214ENST00000617586 542 ntTSL 5 BASIC18.44■□□□□ 0.54
NIPAL3Q6P499 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NIPAL3Q6P499 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NIPAL3Q6P499 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.44■□□□□ 0.54
NIPAL3Q6P499 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NIPAL3Q6P499 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.44■□□□□ 0.54
NIPAL3Q6P499 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
NIPAL3Q6P499 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.44■□□□□ 0.54
NIPAL3Q6P499 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NIPAL3Q6P499 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NIPAL3Q6P499 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
NIPAL3Q6P499 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
NIPAL3Q6P499 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NIPAL3Q6P499 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.43■□□□□ 0.54
NIPAL3Q6P499 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.43■□□□□ 0.54
NIPAL3Q6P499 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NIPAL3Q6P499 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NIPAL3Q6P499 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.43■□□□□ 0.54
NIPAL3Q6P499 RBM17P2-201ENST00000616397 1405 ntBASIC18.43■□□□□ 0.54
NIPAL3Q6P499 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
NIPAL3Q6P499 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
NIPAL3Q6P499 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.43■□□□□ 0.54
NIPAL3Q6P499 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NIPAL3Q6P499 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.43■□□□□ 0.54
NIPAL3Q6P499 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NIPAL3Q6P499 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.43■□□□□ 0.54
NIPAL3Q6P499 MFSD11-216ENST00000590393 1141 ntBASIC18.43■□□□□ 0.54
NIPAL3Q6P499 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NIPAL3Q6P499 AL137784.2-201ENST00000607332 1000 ntBASIC18.43■□□□□ 0.54
NIPAL3Q6P499 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.43■□□□□ 0.54
NIPAL3Q6P499 AC011767.1-201ENST00000617410 1153 ntBASIC18.43■□□□□ 0.54
NIPAL3Q6P499 AC010536.3-201ENST00000620306 533 ntBASIC18.43■□□□□ 0.54
NIPAL3Q6P499 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NIPAL3Q6P499 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
NIPAL3Q6P499 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NIPAL3Q6P499 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms