Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPS4XP62701 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPS4XP62701 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPS4XP62701 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.35■□□□□ 0.53
RPS4XP62701 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPS4XP62701 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPS4XP62701 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPS4XP62701 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPS4XP62701 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.35■□□□□ 0.53
RPS4XP62701 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
RPS4XP62701 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.35■□□□□ 0.53
RPS4XP62701 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RPS4XP62701 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RPS4XP62701 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.35■□□□□ 0.53
RPS4XP62701 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.35■□□□□ 0.53
RPS4XP62701 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RPS4XP62701 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPS4XP62701 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
RPS4XP62701 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.35■□□□□ 0.53
RPS4XP62701 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPS4XP62701 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RPS4XP62701 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
RPS4XP62701 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RPS4XP62701 AL391422.3-201ENST00000603791 2761 ntBASIC18.35■□□□□ 0.53
RPS4XP62701 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPS4XP62701 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.35■□□□□ 0.53
RPS4XP62701 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.34■□□□□ 0.53
RPS4XP62701 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
RPS4XP62701 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPS4XP62701 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPS4XP62701 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RPS4XP62701 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.34■□□□□ 0.53
RPS4XP62701 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RPS4XP62701 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
RPS4XP62701 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RPS4XP62701 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.34■□□□□ 0.53
RPS4XP62701 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPS4XP62701 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.34■□□□□ 0.53
RPS4XP62701 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPS4XP62701 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RPS4XP62701 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPS4XP62701 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
RPS4XP62701 KRT8P36-201ENST00000489121 1440 ntBASIC18.33■□□□□ 0.53
RPS4XP62701 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.33■□□□□ 0.53
RPS4XP62701 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RPS4XP62701 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RPS4XP62701 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RPS4XP62701 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RPS4XP62701 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPS4XP62701 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.33■□□□□ 0.52
RPS4XP62701 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.33■□□□□ 0.52
RPS4XP62701 AL121832.2-201ENST00000610979 668 ntBASIC18.33■□□□□ 0.52
RPS4XP62701 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPS4XP62701 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPS4XP62701 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.33■□□□□ 0.52
RPS4XP62701 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPS4XP62701 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.33■□□□□ 0.52
RPS4XP62701 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
RPS4XP62701 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPS4XP62701 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
RPS4XP62701 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.33■□□□□ 0.52
RPS4XP62701 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPS4XP62701 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.32■□□□□ 0.52
RPS4XP62701 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.32■□□□□ 0.52
RPS4XP62701 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RPS4XP62701 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPS4XP62701 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.32■□□□□ 0.52
RPS4XP62701 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
RPS4XP62701 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
RPS4XP62701 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RPS4XP62701 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
RPS4XP62701 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RPS4XP62701 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.32■□□□□ 0.52
RPS4XP62701 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RPS4XP62701 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPS4XP62701 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RPS4XP62701 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.32■□□□□ 0.52
RPS4XP62701 AC007322.1-201ENST00000426983 750 ntBASIC18.32■□□□□ 0.52
RPS4XP62701 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.32■□□□□ 0.52
RPS4XP62701 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RPS4XP62701 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.32■□□□□ 0.52
RPS4XP62701 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.32■□□□□ 0.52
RPS4XP62701 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.32■□□□□ 0.52
RPS4XP62701 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.32■□□□□ 0.52
RPS4XP62701 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RPS4XP62701 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPS4XP62701 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPS4XP62701 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
RPS4XP62701 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
RPS4XP62701 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPS4XP62701 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.32■□□□□ 0.52
RPS4XP62701 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RPS4XP62701 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.31■□□□□ 0.52
RPS4XP62701 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
RPS4XP62701 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.31■□□□□ 0.52
RPS4XP62701 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPS4XP62701 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPS4XP62701 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.31■□□□□ 0.52
RPS4XP62701 CDV3P1-201ENST00000471403 739 ntBASIC18.31■□□□□ 0.52
RPS4XP62701 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms