Protein–RNA interactions for Protein: P04441

Cd74, H-2 class II histocompatibility antigen gamma chain, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd74P04441 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd74P04441 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cd74P04441 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cd74P04441 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cd74P04441 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Cd74P04441 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cd74P04441 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cd74P04441 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cd74P04441 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cd74P04441 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Cd74P04441 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cd74P04441 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC14.83□□□□□ -0.04
Cd74P04441 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cd74P04441 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cd74P04441 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC14.83□□□□□ -0.04
Cd74P04441 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
Cd74P04441 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Cd74P04441 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cd74P04441 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cd74P04441 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cd74P04441 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cd74P04441 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cd74P04441 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cd74P04441 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cd74P04441 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cd74P04441 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cd74P04441 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cd74P04441 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cd74P04441 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cd74P04441 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cd74P04441 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cd74P04441 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cd74P04441 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cd74P04441 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cd74P04441 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cd74P04441 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cd74P04441 Gm12896-201ENSMUST00000118430 226 ntBASIC14.82□□□□□ -0.04
Cd74P04441 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cd74P04441 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cd74P04441 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cd74P04441 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cd74P04441 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC14.82□□□□□ -0.04
Cd74P04441 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cd74P04441 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cd74P04441 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cd74P04441 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cd74P04441 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cd74P04441 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cd74P04441 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
Cd74P04441 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cd74P04441 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cd74P04441 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cd74P04441 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC14.81□□□□□ -0.04
Cd74P04441 Gm44549-201ENSMUST00000208351 577 ntBASIC14.81□□□□□ -0.04
Cd74P04441 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cd74P04441 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cd74P04441 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC14.81□□□□□ -0.04
Cd74P04441 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cd74P04441 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cd74P04441 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Cd74P04441 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cd74P04441 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cd74P04441 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cd74P04441 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cd74P04441 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cd74P04441 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cd74P04441 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cd74P04441 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cd74P04441 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cd74P04441 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cd74P04441 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC14.8□□□□□ -0.04
Cd74P04441 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Cd74P04441 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cd74P04441 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cd74P04441 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cd74P04441 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cd74P04441 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC14.8□□□□□ -0.04
Cd74P04441 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cd74P04441 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cd74P04441 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cd74P04441 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.8□□□□□ -0.04
Cd74P04441 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cd74P04441 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cd74P04441 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cd74P04441 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cd74P04441 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cd74P04441 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cd74P04441 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cd74P04441 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.79□□□□□ -0.04
Cd74P04441 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cd74P04441 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Cd74P04441 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cd74P04441 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC14.79□□□□□ -0.04
Cd74P04441 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cd74P04441 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cd74P04441 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cd74P04441 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cd74P04441 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cd74P04441 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cd74P04441 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms