Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RTCAO00442 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RTCAO00442 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.39■□□□□ 0.69
RTCAO00442 AC073130.3-201ENST00000624389 2278 ntBASIC19.39■□□□□ 0.69
RTCAO00442 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RTCAO00442 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RTCAO00442 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RTCAO00442 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
RTCAO00442 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.39■□□□□ 0.69
RTCAO00442 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
RTCAO00442 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.39■□□□□ 0.69
RTCAO00442 CROCCP5-201ENST00000436658 830 ntBASIC19.39■□□□□ 0.69
RTCAO00442 AC093787.1-201ENST00000450396 207 ntBASIC19.39■□□□□ 0.69
RTCAO00442 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.39■□□□□ 0.69
RTCAO00442 AC069236.1-201ENST00000604339 616 ntBASIC19.39■□□□□ 0.69
RTCAO00442 AC008694.1-202ENST00000636953 945 ntBASIC19.39■□□□□ 0.69
RTCAO00442 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RTCAO00442 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RTCAO00442 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.39■□□□□ 0.69
RTCAO00442 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RTCAO00442 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RTCAO00442 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.39■□□□□ 0.69
RTCAO00442 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RTCAO00442 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RTCAO00442 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RTCAO00442 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RTCAO00442 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
RTCAO00442 AL355472.2-201ENST00000422958 438 ntBASIC19.38■□□□□ 0.69
RTCAO00442 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
RTCAO00442 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
RTCAO00442 KRT8P36-201ENST00000489121 1440 ntBASIC19.38■□□□□ 0.69
RTCAO00442 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RTCAO00442 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.38■□□□□ 0.69
RTCAO00442 AC092720.2-201ENST00000602388 1665 ntBASIC19.38■□□□□ 0.69
RTCAO00442 AL391422.3-201ENST00000603791 2761 ntBASIC19.38■□□□□ 0.69
RTCAO00442 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.38■□□□□ 0.69
RTCAO00442 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RTCAO00442 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RTCAO00442 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.37■□□□□ 0.69
RTCAO00442 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTCAO00442 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTCAO00442 AC087633.2-202ENST00000565166 1439 ntBASIC19.37■□□□□ 0.69
RTCAO00442 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.37■□□□□ 0.69
RTCAO00442 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTCAO00442 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.37■□□□□ 0.69
RTCAO00442 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.37■□□□□ 0.69
RTCAO00442 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
RTCAO00442 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RTCAO00442 AL512408.1-201ENST00000569378 2000 ntBASIC19.37■□□□□ 0.69
RTCAO00442 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
RTCAO00442 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTCAO00442 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.36■□□□□ 0.69
RTCAO00442 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RTCAO00442 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTCAO00442 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.36■□□□□ 0.69
RTCAO00442 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTCAO00442 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.36■□□□□ 0.69
RTCAO00442 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTCAO00442 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTCAO00442 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.36■□□□□ 0.69
RTCAO00442 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTCAO00442 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTCAO00442 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTCAO00442 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.36■□□□□ 0.69
RTCAO00442 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.36■□□□□ 0.69
RTCAO00442 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTCAO00442 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.36■□□□□ 0.69
RTCAO00442 AL356652.1-201ENST00000615962 565 ntBASIC19.36■□□□□ 0.69
RTCAO00442 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTCAO00442 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTCAO00442 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTCAO00442 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTCAO00442 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RTCAO00442 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTCAO00442 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTCAO00442 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTCAO00442 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.36■□□□□ 0.69
RTCAO00442 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTCAO00442 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTCAO00442 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTCAO00442 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RTCAO00442 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RTCAO00442 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
RTCAO00442 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTCAO00442 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTCAO00442 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RTCAO00442 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTCAO00442 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
RTCAO00442 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTCAO00442 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTCAO00442 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.35■□□□□ 0.69
RTCAO00442 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.35■□□□□ 0.69
RTCAO00442 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.35■□□□□ 0.69
RTCAO00442 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RTCAO00442 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RTCAO00442 OR10C1-204ENST00000622521 1039 ntBASIC19.35■□□□□ 0.69
RTCAO00442 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.35■□□□□ 0.69
RTCAO00442 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.35■□□□□ 0.69
RTCAO00442 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
RTCAO00442 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms