Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 UCA1-201ENST00000397381 2299 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
P04436 TMEM167A-201ENST00000502346 4630 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
P04436 SNX27-201ENST00000368838 1308 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
P04436 TFRC-201ENST00000360110 5111 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
P04436 FAM13A-213ENST00000509094 2762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
P04436 CLEC4M-201ENST00000248228 1865 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
P04436 SORBS2-206ENST00000393528 3043 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
P04436 CNR1-204ENST00000428600 1550 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
P04436 POU6F2-210ENST00000559001 2403 ntTSL 5 BASIC7.86□□□□□ -1.15
P04436 FXYD1-201ENST00000351325 592 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
P04436 DSCR4-202ENST00000398948 777 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
P04436 MIR1269A-201ENST00000408636 105 ntBASIC7.86□□□□□ -1.15
P04436 AL122008.2-201ENST00000412915 570 ntBASIC7.86□□□□□ -1.15
P04436 AC244157.1-201ENST00000415642 163 ntBASIC7.86□□□□□ -1.15
P04436 AL513302.1-201ENST00000415679 428 ntBASIC7.86□□□□□ -1.15
P04436 GACAT1-201ENST00000419650 577 ntTSL 4 BASIC7.86□□□□□ -1.15
P04436 AL359541.1-201ENST00000431097 575 ntTSL 3 BASIC7.86□□□□□ -1.15
P04436 Z97634.1-203ENST00000435229 471 ntBASIC7.86□□□□□ -1.15
P04436 AC112493.1-202ENST00000436019 673 ntTSL 3 BASIC7.86□□□□□ -1.15
P04436 AP000474.1-201ENST00000441465 680 ntTSL 3 BASIC7.86□□□□□ -1.15
P04436 AL035417.1-201ENST00000442754 214 ntBASIC7.86□□□□□ -1.15
P04436 AP1B1P1-202ENST00000448124 191 ntBASIC7.86□□□□□ -1.15
P04436 OR2AI1P-201ENST00000448534 932 ntBASIC7.86□□□□□ -1.15
P04436 OR5S1P-201ENST00000453063 951 ntBASIC7.86□□□□□ -1.15
P04436 RN7SL107P-201ENST00000478127 283 ntBASIC7.86□□□□□ -1.15
P04436 AC006153.1-201ENST00000480135 371 ntTSL 3 BASIC7.86□□□□□ -1.15
P04436 RN7SL130P-201ENST00000489463 305 ntBASIC7.86□□□□□ -1.15
P04436 LINC02517-201ENST00000509453 492 ntTSL 2 BASIC7.86□□□□□ -1.15
P04436 LINC00681-201ENST00000530150 504 ntTSL 2 BASIC7.86□□□□□ -1.15
P04436 HTATIP2-206ENST00000531058 1060 ntTSL 3 BASIC7.86□□□□□ -1.15
P04436 AC078886.1-201ENST00000549144 554 ntBASIC7.86□□□□□ -1.15
P04436 LINC02134-201ENST00000562980 557 ntTSL 5 BASIC7.86□□□□□ -1.15
P04436 MIR5008-201ENST00000584300 94 ntBASIC7.86□□□□□ -1.15
P04436 AP005131.4-202ENST00000590468 570 ntTSL 4 BASIC7.86□□□□□ -1.15
P04436 ELOF1-207ENST00000591674 679 ntTSL 2 BASIC7.86□□□□□ -1.15
P04436 AC007161.2-201ENST00000604734 1109 ntBASIC7.86□□□□□ -1.15
P04436 AC097534.2-202ENST00000608794 587 ntTSL 2 BASIC7.86□□□□□ -1.15
P04436 AC097534.2-201ENST00000609153 751 ntTSL 3 BASIC7.86□□□□□ -1.15
P04436 MIR6732-201ENST00000619365 60 ntBASIC7.86□□□□□ -1.15
P04436 MIR6754-201ENST00000621121 66 ntBASIC7.86□□□□□ -1.15
P04436 AC079416.2-201ENST00000625035 1193 ntBASIC7.86□□□□□ -1.15
P04436 EFHC1-226ENST00000636954 2129 ntTSL 2 BASIC7.86□□□□□ -1.15
P04436 AC079602.4-201ENST00000637836 532 ntBASIC7.86□□□□□ -1.15
P04436 CHI3L2-204ENST00000466741 1518 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
P04436 ASB8-205ENST00000536549 2610 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
P04436 SH3GL3-201ENST00000324537 2012 ntTSL 2 BASIC7.86□□□□□ -1.15
P04436 CLIC5-201ENST00000185206 6023 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
P04436 NUSAP1-212ENST00000560747 2256 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
P04436 ZNF441-201ENST00000357901 4356 ntAPPRIS P1 TSL 3 BASIC7.86□□□□□ -1.15
P04436 CABLES1-203ENST00000420687 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
P04436 CD164-201ENST00000275080 2954 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
P04436 MAPK10-371ENST00000641952 5209 ntBASIC7.85□□□□□ -1.15
P04436 MYO10-201ENST00000274203 11456 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
P04436 MDM2-202ENST00000258149 12633 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
P04436 NLRC4-201ENST00000342905 1362 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
P04436 AP002957.1-203ENST00000526091 1897 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
P04436 NOX4-210ENST00000527956 2379 ntTSL 5 BASIC7.85□□□□□ -1.15
P04436 UTY-209ENST00000537580 6490 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
P04436 AC092656.1-201ENST00000503243 2097 ntTSL 2 BASIC7.85□□□□□ -1.15
P04436 TDGF1-201ENST00000296145 2513 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
P04436 TARS-202ENST00000455217 2523 ntTSL 2 BASIC7.85□□□□□ -1.15
P04436 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
P04436 PDE1A-203ENST00000409365 2034 ntTSL 5 BASIC7.85□□□□□ -1.15
P04436 NTRK3-221ENST00000629765 2714 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
P04436 SUGT1P3-201ENST00000304932 1051 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
P04436 AL137845.1-201ENST00000340681 1110 ntBASIC7.85□□□□□ -1.15
P04436 GAGE2A-201ENST00000362097 528 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
P04436 AIF1-203ENST00000376059 711 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
P04436 IGHV1-24-201ENST00000390610 411 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
P04436 ANXA2P3-201ENST00000404883 1008 ntBASIC7.85□□□□□ -1.15
P04436 AL359475.1-201ENST00000414505 292 ntTSL 3 BASIC7.85□□□□□ -1.15
P04436 AC023669.1-201ENST00000414915 524 ntTSL 3 BASIC7.85□□□□□ -1.15
P04436 SLC8A1-AS1-203ENST00000418854 545 ntTSL 4 BASIC7.85□□□□□ -1.15
P04436 HLA-DQB1-AS1-201ENST00000419852 552 ntBASIC7.85□□□□□ -1.15
P04436 BACE2-IT1-201ENST00000433378 382 ntTSL 5 BASIC7.85□□□□□ -1.15
P04436 LINC01422-202ENST00000438113 517 ntTSL 5 BASIC7.85□□□□□ -1.15
P04436 MIR4435-2HG-208ENST00000439494 707 ntTSL 5 BASIC7.85□□□□□ -1.15
P04436 NPM1P51-201ENST00000443470 744 ntBASIC7.85□□□□□ -1.15
P04436 AC242426.2-201ENST00000446956 795 ntBASIC7.85□□□□□ -1.15
P04436 DAZAP2P1-201ENST00000475212 503 ntBASIC7.85□□□□□ -1.15
P04436 RN7SL702P-201ENST00000488394 292 ntBASIC7.85□□□□□ -1.15
P04436 AC244505.1-201ENST00000502642 307 ntBASIC7.85□□□□□ -1.15
P04436 AC091901.1-201ENST00000517722 736 ntTSL 3 BASIC7.85□□□□□ -1.15
P04436 AC015468.1-201ENST00000523852 874 ntTSL 3 BASIC7.85□□□□□ -1.15
P04436 NOVA1-AS1-201ENST00000547786 818 ntTSL 3 BASIC7.85□□□□□ -1.15
P04436 PSMA3-AS1-210ENST00000556002 1039 ntTSL 2 BASIC7.85□□□□□ -1.15
P04436 AC127029.1-201ENST00000560822 237 ntBASIC7.85□□□□□ -1.15
P04436 ARPP19-209ENST00000567669 745 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
P04436 LINC01927-201ENST00000582231 712 ntTSL 3 BASIC7.85□□□□□ -1.15
P04436 AP001198.2-201ENST00000593121 466 ntTSL 2 BASIC7.85□□□□□ -1.15
P04436 LINC01176-202ENST00000628121 716 ntTSL 3 BASIC7.85□□□□□ -1.15
P04436 AC091013.1-201ENST00000499752 3734 ntTSL 2 BASIC7.85□□□□□ -1.15
P04436 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC7.85□□□□□ -1.15
P04436 THBS3-210ENST00000541576 3200 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
P04436 CLEC5A-207ENST00000551012 1420 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
P04436 AC008033.3-201ENST00000612531 1407 ntBASIC7.85□□□□□ -1.15
P04436 FABP7-201ENST00000356535 2086 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
P04436 CD164-203ENST00000324953 2936 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
P04436 EXOC6-204ENST00000443748 3310 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
P04436 SLAMF7-203ENST00000368043 2689 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms