Protein–RNA interactions for Protein: Q9H3R1

NDST4, Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 4, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDST4Q9H3R1 KRT8P36-201ENST00000489121 1440 ntBASIC22.19■■□□□ 1.14
NDST4Q9H3R1 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC22.19■■□□□ 1.14
NDST4Q9H3R1 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
NDST4Q9H3R1 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
NDST4Q9H3R1 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC22.19■■□□□ 1.14
NDST4Q9H3R1 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC22.19■■□□□ 1.14
NDST4Q9H3R1 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
NDST4Q9H3R1 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
NDST4Q9H3R1 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC22.18■■□□□ 1.14
NDST4Q9H3R1 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
NDST4Q9H3R1 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC22.18■■□□□ 1.14
NDST4Q9H3R1 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC22.18■■□□□ 1.14
NDST4Q9H3R1 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
NDST4Q9H3R1 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC22.18■■□□□ 1.14
NDST4Q9H3R1 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
NDST4Q9H3R1 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
NDST4Q9H3R1 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
NDST4Q9H3R1 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC22.18■■□□□ 1.14
NDST4Q9H3R1 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
NDST4Q9H3R1 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
NDST4Q9H3R1 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
NDST4Q9H3R1 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
NDST4Q9H3R1 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC22.17■■□□□ 1.14
NDST4Q9H3R1 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
NDST4Q9H3R1 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
NDST4Q9H3R1 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC22.17■■□□□ 1.14
NDST4Q9H3R1 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC22.17■■□□□ 1.14
NDST4Q9H3R1 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
NDST4Q9H3R1 PARP1-202ENST00000366792 553 ntTSL 3 BASIC22.17■■□□□ 1.14
NDST4Q9H3R1 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
NDST4Q9H3R1 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC22.17■■□□□ 1.14
NDST4Q9H3R1 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
NDST4Q9H3R1 NTF6G-201ENST00000591094 616 ntBASIC22.17■■□□□ 1.14
NDST4Q9H3R1 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
NDST4Q9H3R1 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
NDST4Q9H3R1 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
NDST4Q9H3R1 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
NDST4Q9H3R1 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC22.17■■□□□ 1.14
NDST4Q9H3R1 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
NDST4Q9H3R1 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
NDST4Q9H3R1 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
NDST4Q9H3R1 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
NDST4Q9H3R1 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
NDST4Q9H3R1 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
NDST4Q9H3R1 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
NDST4Q9H3R1 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
NDST4Q9H3R1 CDV3P1-201ENST00000471403 739 ntBASIC22.16■■□□□ 1.14
NDST4Q9H3R1 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC22.16■■□□□ 1.14
NDST4Q9H3R1 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
NDST4Q9H3R1 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
NDST4Q9H3R1 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC22.16■■□□□ 1.14
NDST4Q9H3R1 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
NDST4Q9H3R1 TCF3P1-201ENST00000423021 1937 ntBASIC22.16■■□□□ 1.14
NDST4Q9H3R1 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
NDST4Q9H3R1 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
NDST4Q9H3R1 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
NDST4Q9H3R1 BID-204ENST00000399767 2129 ntTSL 2 BASIC22.15■■□□□ 1.14
NDST4Q9H3R1 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
NDST4Q9H3R1 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
NDST4Q9H3R1 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC22.15■■□□□ 1.14
NDST4Q9H3R1 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
NDST4Q9H3R1 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
NDST4Q9H3R1 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC22.15■■□□□ 1.14
NDST4Q9H3R1 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC22.15■■□□□ 1.14
NDST4Q9H3R1 FAM21FP-204ENST00000608637 956 ntBASIC22.15■■□□□ 1.14
NDST4Q9H3R1 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
NDST4Q9H3R1 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC22.15■■□□□ 1.14
NDST4Q9H3R1 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
NDST4Q9H3R1 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
NDST4Q9H3R1 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
NDST4Q9H3R1 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC22.15■■□□□ 1.14
NDST4Q9H3R1 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
NDST4Q9H3R1 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC22.15■■□□□ 1.14
NDST4Q9H3R1 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC22.15■■□□□ 1.14
NDST4Q9H3R1 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
NDST4Q9H3R1 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
NDST4Q9H3R1 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC22.14■■□□□ 1.14
NDST4Q9H3R1 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
NDST4Q9H3R1 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC22.14■■□□□ 1.14
NDST4Q9H3R1 AC097381.1-201ENST00000429019 1296 ntBASIC22.14■■□□□ 1.13
NDST4Q9H3R1 AC034268.1-201ENST00000441047 882 ntBASIC22.14■■□□□ 1.13
NDST4Q9H3R1 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
NDST4Q9H3R1 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC22.14■■□□□ 1.13
NDST4Q9H3R1 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
NDST4Q9H3R1 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC22.14■■□□□ 1.13
NDST4Q9H3R1 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC22.14■■□□□ 1.13
NDST4Q9H3R1 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
NDST4Q9H3R1 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
NDST4Q9H3R1 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC22.14■■□□□ 1.13
NDST4Q9H3R1 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
NDST4Q9H3R1 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
NDST4Q9H3R1 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
NDST4Q9H3R1 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC22.14■■□□□ 1.13
NDST4Q9H3R1 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
NDST4Q9H3R1 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
NDST4Q9H3R1 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC22.14■■□□□ 1.13
NDST4Q9H3R1 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC22.14■■□□□ 1.13
NDST4Q9H3R1 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC22.14■■□□□ 1.13
NDST4Q9H3R1 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC22.13■■□□□ 1.13
NDST4Q9H3R1 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms