Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
POLR2J3Q9H1A7 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
POLR2J3Q9H1A7 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
POLR2J3Q9H1A7 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
POLR2J3Q9H1A7 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
POLR2J3Q9H1A7 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.79■□□□□ 0.6
POLR2J3Q9H1A7 AC092720.2-201ENST00000602388 1665 ntBASIC18.79■□□□□ 0.6
POLR2J3Q9H1A7 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
POLR2J3Q9H1A7 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
POLR2J3Q9H1A7 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.79■□□□□ 0.6
POLR2J3Q9H1A7 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
POLR2J3Q9H1A7 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
POLR2J3Q9H1A7 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
POLR2J3Q9H1A7 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.78■□□□□ 0.6
POLR2J3Q9H1A7 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
POLR2J3Q9H1A7 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
POLR2J3Q9H1A7 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.78■□□□□ 0.6
POLR2J3Q9H1A7 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
POLR2J3Q9H1A7 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
POLR2J3Q9H1A7 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
POLR2J3Q9H1A7 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
POLR2J3Q9H1A7 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
POLR2J3Q9H1A7 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
POLR2J3Q9H1A7 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.78■□□□□ 0.6
POLR2J3Q9H1A7 SLC7A5P1-201ENST00000568957 537 ntBASIC18.78■□□□□ 0.6
POLR2J3Q9H1A7 AP001160.3-201ENST00000601484 763 ntBASIC18.78■□□□□ 0.6
POLR2J3Q9H1A7 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.78■□□□□ 0.6
POLR2J3Q9H1A7 AC243732.1-201ENST00000612648 864 ntBASIC18.78■□□□□ 0.6
POLR2J3Q9H1A7 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
POLR2J3Q9H1A7 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.78■□□□□ 0.6
POLR2J3Q9H1A7 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
POLR2J3Q9H1A7 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.78■□□□□ 0.6
POLR2J3Q9H1A7 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.78■□□□□ 0.6
POLR2J3Q9H1A7 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
POLR2J3Q9H1A7 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
POLR2J3Q9H1A7 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
POLR2J3Q9H1A7 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.77■□□□□ 0.6
POLR2J3Q9H1A7 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
POLR2J3Q9H1A7 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
POLR2J3Q9H1A7 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
POLR2J3Q9H1A7 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.77■□□□□ 0.6
POLR2J3Q9H1A7 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
POLR2J3Q9H1A7 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
POLR2J3Q9H1A7 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
POLR2J3Q9H1A7 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.77■□□□□ 0.6
POLR2J3Q9H1A7 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
POLR2J3Q9H1A7 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.77■□□□□ 0.6
POLR2J3Q9H1A7 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.77■□□□□ 0.6
POLR2J3Q9H1A7 TERF1P2-201ENST00000583350 1212 ntBASIC18.77■□□□□ 0.6
POLR2J3Q9H1A7 AC104187.1-201ENST00000607510 612 ntBASIC18.77■□□□□ 0.6
POLR2J3Q9H1A7 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.77■□□□□ 0.6
POLR2J3Q9H1A7 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
POLR2J3Q9H1A7 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
POLR2J3Q9H1A7 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
POLR2J3Q9H1A7 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
POLR2J3Q9H1A7 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.77■□□□□ 0.6
POLR2J3Q9H1A7 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
POLR2J3Q9H1A7 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
POLR2J3Q9H1A7 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
POLR2J3Q9H1A7 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
POLR2J3Q9H1A7 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
POLR2J3Q9H1A7 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
POLR2J3Q9H1A7 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.76■□□□□ 0.59
POLR2J3Q9H1A7 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
POLR2J3Q9H1A7 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
POLR2J3Q9H1A7 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
POLR2J3Q9H1A7 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
POLR2J3Q9H1A7 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
POLR2J3Q9H1A7 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
POLR2J3Q9H1A7 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
POLR2J3Q9H1A7 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
POLR2J3Q9H1A7 YBX1P1-201ENST00000445822 960 ntBASIC18.76■□□□□ 0.59
POLR2J3Q9H1A7 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.76■□□□□ 0.59
POLR2J3Q9H1A7 MIR2861-201ENST00000636310 90 ntBASIC18.76■□□□□ 0.59
POLR2J3Q9H1A7 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
POLR2J3Q9H1A7 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
POLR2J3Q9H1A7 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
POLR2J3Q9H1A7 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.76■□□□□ 0.59
POLR2J3Q9H1A7 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.76■□□□□ 0.59
POLR2J3Q9H1A7 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
POLR2J3Q9H1A7 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
POLR2J3Q9H1A7 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
POLR2J3Q9H1A7 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.75■□□□□ 0.59
POLR2J3Q9H1A7 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
POLR2J3Q9H1A7 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
POLR2J3Q9H1A7 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
POLR2J3Q9H1A7 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.75■□□□□ 0.59
POLR2J3Q9H1A7 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.75■□□□□ 0.59
POLR2J3Q9H1A7 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
POLR2J3Q9H1A7 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
POLR2J3Q9H1A7 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
POLR2J3Q9H1A7 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
POLR2J3Q9H1A7 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
POLR2J3Q9H1A7 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
POLR2J3Q9H1A7 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
POLR2J3Q9H1A7 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.74■□□□□ 0.59
POLR2J3Q9H1A7 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.74■□□□□ 0.59
POLR2J3Q9H1A7 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
POLR2J3Q9H1A7 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.74■□□□□ 0.59
POLR2J3Q9H1A7 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms